HIV-1 diversity in viral reservoirs obtained from circulating T-cell subsets during early ART and beyond

• Yuepeng Zhang ,

  Contributed equally to this work with: Yuepeng Zhang, Fabian Otte

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Molecular Virology, Department of Biomedicine, University of Basel, Basel, Switzerland

  https://orcid.org/0009-0009-7923-2173

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• Fabian Otte ,

  Contributed equally to this work with: Yuepeng Zhang, Fabian Otte

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Molecular Virology, Department of Biomedicine, University of Basel, Basel, Switzerland

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• Marcel Stoeckle,

  Roles Resources, Writing – review & editing

  Affiliation Infectiology, University Hospital Basel, Basel, Switzerland

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• Alexander Thielen,

  Roles Data curation, Formal analysis, Methodology, Software, Validation, Writing – review & editing

  Affiliation Seq-IT GmbH & Co.KG, Kaiserslautern, Germany

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• Martin Däumer,

  Roles Writing – review & editing

  Affiliation Seq-IT GmbH & Co.KG, Kaiserslautern, Germany

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• Rolf Kaiser,

  Roles Writing – review & editing

  Affiliations Institute of Virology, University of Cologne, Cologne, Germany, German Center for Infection Research, Partner Site Bonn-Cologne, Cologne, Germany

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• Katharina Kusejko,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland

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• Karin J. Metzner,

  Roles Writing – review & editing

  Affiliations Department of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland, Institute of Medical Virology, University of Zurich, Zurich, Switzerland

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• Thomas Klimkait ,

  Roles Conceptualization, Funding acquisition, Investigation, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: thomas.klimkait@unibas.ch

  Affiliation Molecular Virology, Department of Biomedicine, University of Basel, Basel, Switzerland

  https://orcid.org/0000-0003-4945-6511

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• and the Swiss HIV Cohort Study