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Open Access
Peer-reviewed
Research Article
Dissecting positive selection events and immunological drives during the evolution of adeno-associated virus lineages
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Lirong Li ,
Contributed equally to this work with: Lirong Li, Runkuan Qin, Yunbo Liu
Roles Investigation, Methodology, Validation
Affiliation Department of Cardiology and Laboratory of Gene Therapy for Heart Diseases, State Key Laboratory of Biotherapy, and Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Runkuan Qin ,
Contributed equally to this work with: Lirong Li, Runkuan Qin, Yunbo Liu
Roles Investigation, Validation
Affiliation Department of Cardiology and Laboratory of Gene Therapy for Heart Diseases, State Key Laboratory of Biotherapy, and Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Yunbo Liu ,
Contributed equally to this work with: Lirong Li, Runkuan Qin, Yunbo Liu
Roles Investigation, Validation
Affiliation Department of Cardiology and Laboratory of Gene Therapy for Heart Diseases, State Key Laboratory of Biotherapy, and Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Yu-Shan Tseng,
Roles Investigation, Methodology, Visualization
Affiliation Department of Biochemistry and Molecular Biology, Center for Structural Biology, The McKnight Brain Institute, University of Florida, Gainesville, Florida, United States of America
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Weihan Zhang,
Roles Investigation, Resources
Affiliation General Surgery Department, Gastric Cancer Center and Laboratory of Gastric Cancer, State Key Laboratory of Biotherapy and Collaborative Innovation Center of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Lin Yu,
Roles Investigation, Methodology
Affiliation State Key Laboratory of Biotherapy and Cancer Center, Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Mario Mietzsch,
Roles Investigation, Visualization, Writing – review & editing
Affiliation Department of Biochemistry and Molecular Biology, Center for Structural Biology, The McKnight Brain Institute, University of Florida, Gainesville, Florida, United States of America
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Xinkai Zou,
Roles Investigation, Methodology, Visualization
Affiliation Center for Immunology and Hematology, Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Haizhou Liu,
Roles Investigation, Methodology
Affiliation Computational Virology Group, Center for Bacteria and Viruses Resources and Bioinformation, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, Hubei, China
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Guangwen Lu,
Roles Methodology, Validation, Visualization, Writing – review & editing
Affiliation Department of Emergency Medicine, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Hongbo Hu,
Roles Investigation, Methodology
Affiliation Center for Immunology and Hematology, Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Robert Mckenna,
Roles Funding acquisition, Methodology
Affiliation Department of Biochemistry and Molecular Biology, Center for Structural Biology, The McKnight Brain Institute, University of Florida, Gainesville, Florida, United States of America
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Jinliang Yang,
Roles Investigation, Methodology
Affiliation State Key Laboratory of Biotherapy and Cancer Center, Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Yuquan Wei,
Roles Conceptualization, Methodology
Affiliation Laboratory of Aging Research and Cancer Drug Target, State Key Laboratory of Biotherapy and Cancer Center, National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Mavis Agbandje-Mckenna †,
† Deceased.
Roles Investigation, Methodology, Writing – review & editing
Affiliation Department of Biochemistry and Molecular Biology, Center for Structural Biology, The McKnight Brain Institute, University of Florida, Gainesville, Florida, United States of America
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Jiankun Hu ,
Roles Resources, Supervision
* E-mail: hujkwch@126.com (JH); yanglin0@hotmail.com (LY)
Affiliation General Surgery Department, Gastric Cancer Center and Laboratory of Gastric Cancer, State Key Laboratory of Biotherapy and Collaborative Innovation Center of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Lin Yang
Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Visualization, Writing – original draft, Writing – review & editing
* E-mail: hujkwch@126.com (JH); yanglin0@hotmail.com (LY)
Affiliation Department of Cardiology and Laboratory of Gene Therapy for Heart Diseases, State Key Laboratory of Biotherapy, and Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Dissecting positive selection events and immunological drives during the evolution of adeno-associated virus lineages
- Lirong Li,
- Runkuan Qin,
- Yunbo Liu,
- Yu-Shan Tseng,
- Weihan Zhang,
- Lin Yu,
- Mario Mietzsch,
- Xinkai Zou,
- Haizhou Liu,
- Guangwen Lu
- Published: June 17, 2024
- https://doi.org/10.1371/journal.ppat.1012260