Understanding early HIV-1 rebound dynamics following antiretroviral therapy interruption: The importance of effector cell expansion

• Tin Phan,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Jessica M. Conway,

  Roles Conceptualization, Investigation, Methodology, Validation, Writing – review & editing

  Affiliations Department of Mathematics, Pennsylvania State University, College Township, Pennsylvania, United States of America, Department of Biology, Pennsylvania State University, College Township, Pennsylvania, United States of America

  ⨯
• Nicole Pagane,

  Roles Investigation, Validation, Writing – original draft, Writing – review & editing

  Affiliations Program in Computational and Systems Biology, Massachusetts Institute of Technology; Cambridge, Massachusetts, United States of America, Ragon Institute of MGH, MIT, and Harvard; Cambridge, Massachusetts, United States of America

  ⨯
• Jasmine Kreig,

  Roles Investigation, Validation, Writing – review & editing

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Narmada Sambaturu,

  Roles Investigation, Validation, Writing – review & editing

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Sarafa Iyaniwura,

  Roles Investigation, Validation, Writing – review & editing

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Jonathan Z. Li,

  Roles Conceptualization, Data curation, Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliation Department of Medicine, Division of Infectious Diseases, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, United States of America

  ⨯
• Ruy M. Ribeiro,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Ruian Ke ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Writing – review & editing

  * E-mail: rke@lanl.gov (RK); asp@lanl.gov (ASP)

  Affiliation Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

  ⨯
• Alan S. Perelson

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Writing – review & editing

  * E-mail: rke@lanl.gov (RK); asp@lanl.gov (ASP)

  Affiliations Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America, Santa Fe Institute, Santa Fe, New Mexico, United States of America

  https://orcid.org/0000-0002-2455-0002

  ⨯