Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis

• Paulo Vieira ,

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Project administration, Writing – original draft, Writing – review & editing

  * E-mail: pvieira@vt.edu

  Affiliations USDA-ARS Molecular Plant Pathology Laboratory, Beltsville, Maryland, United States of America, School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, Virginia, United States of America

  https://orcid.org/0000-0001-5627-2628

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• Roxana Y. Myers,

  Roles Formal analysis, Funding acquisition, Writing – review & editing

  Affiliation Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, USDA ARS, Hilo, Hawaii, United States of America

  https://orcid.org/0000-0002-7465-7895

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• Clement Pellegrin,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliation Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom

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• Catherine Wram,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliation USDA-ARS Horticultural Crops Research Unit, Corvallis, Oregon, United States of America

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• Cedar Hesse,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliation USDA-ARS Horticultural Crops Research Unit, Corvallis, Oregon, United States of America

  https://orcid.org/0000-0002-1006-0491

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• Thomas R. Maier,

  Roles Formal analysis, Methodology, Writing – review & editing

  Affiliation Department of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa, United States of America

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• Jonathan Shao,

  Roles Data curation, Writing – review & editing

  Affiliation USDA-ARS Molecular Plant Pathology Laboratory, Beltsville, Maryland, United States of America

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• Georgios D. Koutsovoulos,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliation INRAE, Université Côte d’Azur, CNRS, Institute Sophia Agrobiotech, Sophia Antipolis, France

  https://orcid.org/0000-0003-3406-3715

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• Inga Zasada,

  Roles Formal analysis, Writing – review & editing

  Affiliation USDA-ARS Horticultural Crops Research Unit, Corvallis, Oregon, United States of America

  https://orcid.org/0000-0001-6603-3073

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• Tracie Matsumoto,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center, USDA ARS, Hilo, Hawaii, United States of America

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• Etienne G. J. Danchin,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliation INRAE, Université Côte d’Azur, CNRS, Institute Sophia Agrobiotech, Sophia Antipolis, France

  https://orcid.org/0000-0003-4146-5608

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• Thomas J. Baum,

  Roles Funding acquisition, Methodology, Writing – review & editing

  Affiliation Department of Plant Pathology and Microbiology, Iowa State University, Ames, Iowa, United States of America

  https://orcid.org/0000-0001-9241-3141

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• Sebastian Eves-van den Akker,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom

  https://orcid.org/0000-0002-8833-9679

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• Lev G. Nemchinov

  Roles Formal analysis, Funding acquisition, Methodology, Writing – review & editing

  Affiliation USDA-ARS Molecular Plant Pathology Laboratory, Beltsville, Maryland, United States of America

  https://orcid.org/0000-0003-0314-8150

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