Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City

• Simon Dellicour ,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: simon.dellicour@ulb.ac.be (SD); ralf.duerr@nyulangone.org (RD); adriana.heguy@nyulangone.org (AH)

  Affiliations Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Bruxelles, Belgium, Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven, University of Leuven, Leuven, Belgium

  https://orcid.org/0000-0001-9558-1052

  ⨯
• Samuel L. Hong,

  Roles Data curation, Formal analysis, Investigation, Methodology, Resources, Validation, Writing – review & editing

  Affiliation Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven, University of Leuven, Leuven, Belgium

  ⨯
• Bram Vrancken,

  Roles Formal analysis, Investigation, Methodology, Resources, Validation, Writing – review & editing

  Affiliation Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven, University of Leuven, Leuven, Belgium

  ⨯
• Antoine Chaillon,

  Roles Investigation, Resources, Validation, Writing – review & editing

  Affiliation Division of Infectious Diseases and Global Public Health, University of California San Diego, California, United States of America

  ⨯
• Mandev S. Gill,

  Roles Formal analysis, Investigation, Methodology, Validation, Writing – review & editing

  Affiliation Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven, University of Leuven, Leuven, Belgium

  ⨯
• Matthew T. Maurano,

  Roles Investigation, Resources, Writing – review & editing

  Affiliations Department of Pathology, NYU Grossman School of Medicine, New York, New York, United States of America, Institute for Systems Genetics, NYU Grossman School of Medicine, New York, New York, United States of America

  ⨯
• Sitharam Ramaswami,

  Roles Data curation, Investigation, Resources, Writing – review & editing

  Affiliation Genome Technology Center, Office for Science and Research, NYU Langone Health, New York, New York, United States of America

  ⨯
• Paul Zappile,

  Roles Investigation, Resources, Writing – review & editing

  Affiliation Genome Technology Center, Office for Science and Research, NYU Langone Health, New York, New York, United States of America

  ⨯
• Christian Marier,

  Roles Investigation, Resources, Writing – review & editing

  Affiliation Genome Technology Center, Office for Science and Research, NYU Langone Health, New York, New York, United States of America

  ⨯
• Gordon W. Harkins,

  Roles Investigation, Resources, Validation, Writing – review & editing

  Affiliation South African Medical Research Council Capacity Development Unit, South African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa

  ⨯
• Guy Baele,

  Roles Conceptualization, Investigation, Methodology, Resources, Validation, Writing – review & editing

  Affiliation Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Clinical and Epidemiological Virology, KU Leuven, University of Leuven, Leuven, Belgium

  ⨯
• Ralf Duerr ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Project administration, Validation, Visualization, Writing – review & editing

  * E-mail: simon.dellicour@ulb.ac.be (SD); ralf.duerr@nyulangone.org (RD); adriana.heguy@nyulangone.org (AH)

  Affiliations Department of Pathology, NYU Grossman School of Medicine, New York, New York, United States of America, Department of Microbiology, NYU Grossman School of Medicine, New York, New York, United States of America

  ⨯
• Adriana Heguy

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Project administration, Supervision, Writing – review & editing

  * E-mail: simon.dellicour@ulb.ac.be (SD); ralf.duerr@nyulangone.org (RD); adriana.heguy@nyulangone.org (AH)

  Affiliations Department of Pathology, NYU Grossman School of Medicine, New York, New York, United States of America, Genome Technology Center, Office for Science and Research, NYU Langone Health, New York, New York, United States of America

  ⨯