Helicobacter pylori diversification during chronic infection within a single host generates sub-populations with distinct phenotypes

• Laura K. Jackson,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Visualization, Writing – original draft

  Affiliations Molecular and Cellular Biology Graduate Program, University of Washington, Seattle, WA, United States of America, Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  https://orcid.org/0000-0002-3331-9056

  ⨯
• Barney Potter,

  Roles Formal analysis, Investigation, Visualization

  Affiliation Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  https://orcid.org/0000-0001-9476-149X

  ⨯
• Sean Schneider,

  Roles Formal analysis, Investigation

  Affiliation Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  ⨯
• Matthew Fitzgibbon,

  Roles Formal analysis

  Affiliation Genomics & Bioinformatics Shared Resource, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  ⨯
• Kris Blair,

  Roles Formal analysis, Investigation

  Affiliations Molecular and Cellular Biology Graduate Program, University of Washington, Seattle, WA, United States of America, Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  https://orcid.org/0000-0002-2887-5592

  ⨯
• Hajirah Farah,

  Roles Formal analysis, Investigation

  Affiliations Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America, Department of Microbiology, University of Washington School of Medicine, Seattle, WA, United States of America

  https://orcid.org/0000-0003-0558-540X

  ⨯
• Uma Krishna,

  Roles Resources

  Affiliation Division of Gastroenterology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, United States of America

  https://orcid.org/0000-0002-8162-7010

  ⨯
• Trevor Bedford,

  Roles Methodology, Software

  Affiliations Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America, Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America

  https://orcid.org/0000-0002-4039-5794

  ⨯
• Richard M. Peek Jr,

  Roles Conceptualization, Resources

  Affiliation Division of Gastroenterology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, United States of America

  ⨯
• Nina R. Salama

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Supervision, Writing – review & editing

  * E-mail: nsalama@fredhutch.org

  Affiliations Molecular and Cellular Biology Graduate Program, University of Washington, Seattle, WA, United States of America, Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, United States of America, Department of Microbiology, University of Washington School of Medicine, Seattle, WA, United States of America

  https://orcid.org/0000-0003-2762-1424

  ⨯