Insertion and deletion evolution reflects antibiotics selection pressure in a Mycobacterium tuberculosis outbreak

• Maxime Godfroid ,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  * E-mail: maxime.godfroid@college-de-france.fr (MG); anne.kupczok@wur.nl (AK)

  Current address: Center for Interdisciplinary Research in Biology (CIRB), Collège de France, CNRS, INSERM, PSL Research University, Paris, France

  Affiliation Institute of General Microbiology, Kiel University, Kiel, Germany

  http://orcid.org/0000-0001-9037-4265

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• Tal Dagan,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Supervision, Writing – review & editing

  Affiliation Institute of General Microbiology, Kiel University, Kiel, Germany

  http://orcid.org/0000-0002-9042-192X

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• Matthias Merker,

  Roles Conceptualization, Data curation, Writing – review & editing

  Affiliations Molecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany, German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany

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• Thomas A. Kohl,

  Roles Conceptualization, Data curation, Writing – review & editing

  Affiliations Molecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany, German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany

  http://orcid.org/0000-0002-1126-6803

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• Roland Diel,

  Roles Data curation, Writing – review & editing

  Affiliations German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany, Institute for Epidemiology, University Medical Hospital Schleswig-Holstein, Kiel, Germany, Lungenclinic Grosshansdorf, Airway Research Center North (ARCN), Member of the German Center for Lung Research (DZL), Großhansdorf, Germany

  http://orcid.org/0000-0001-8304-7709

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• Florian P. Maurer,

  Roles Data curation, Writing – review & editing

  Affiliations National and WHO Supranational Reference Center for Mycobacteria, Research Center Borstel, Borstel, Germany, Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf, Hamburg, Germany

  http://orcid.org/0000-0001-8353-5964

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• Stefan Niemann,

  Roles Conceptualization, Data curation, Funding acquisition, Writing – review & editing

  Affiliations Molecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany, German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany

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• Anne Kupczok

  Roles Conceptualization, Investigation, Methodology, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: maxime.godfroid@college-de-france.fr (MG); anne.kupczok@wur.nl (AK)

  Current address: Bioinformatics Group, Wageningen University & Research, Wageningen, The Netherlands

  Affiliation Institute of General Microbiology, Kiel University, Kiel, Germany

  http://orcid.org/0000-0001-5237-1899

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