Stable integrant-specific differences in bimodal HIV-1 expression patterns revealed by high-throughput analysis

• David F. Read ,

  Contributed equally to this work with: David F. Read, Edmond Atindaana

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan, United States of America, Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0002-8464-6081

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• Edmond Atindaana ,

  Contributed equally to this work with: David F. Read, Edmond Atindaana

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Validation, Writing – review & editing

  Affiliations Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America, West African Centre for Cell Biology of Infectious Pathogens (WACCBIP) and Department of Biochemistry, Cell & Molecular Biology, University of Ghana, Legon, Greater Accra Region, Ghana

  http://orcid.org/0000-0003-2355-5730

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• Kalyani Pyaram,

  Roles Data curation, Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0003-2744-7470

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• Feng Yang,

  Roles Conceptualization, Data curation, Investigation, Methodology, Resources, Writing – review & editing

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

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• Sarah Emery,

  Roles Data curation, Investigation, Methodology, Resources, Software, Writing – review & editing

  Affiliation Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

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• Anna Cheong,

  Roles Investigation, Methodology, Software, Writing – review & editing

  Affiliation Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0002-0192-071X

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• Katherine R. Nakama,

  Roles Investigation, Writing – review & editing

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

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• Cleo Burnett,

  Roles Methodology, Visualization

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0002-6754-0787

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• Erin T. Larragoite,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Department of Pathology, University of Utah, Salt Lake City, Utah, United States of America

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• Emilie Battivelli,

  Roles Resources, Writing – original draft, Writing – review & editing

  Affiliations Department of Medicine, University of California San Francisco, San Francisco, California, United States of America, Buck Institute for Research on Aging, Novato, California, United States of America

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• Eric Verdin,

  Roles Resources, Writing – review & editing

  Affiliations Department of Medicine, University of California San Francisco, San Francisco, California, United States of America, Buck Institute for Research on Aging, Novato, California, United States of America

  http://orcid.org/0000-0003-3703-3183

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• Vicente Planelles,

  Roles Methodology, Resources, Writing – original draft, Writing – review & editing

  Affiliation Department of Pathology, University of Utah, Salt Lake City, Utah, United States of America

  http://orcid.org/0000-0002-5318-2982

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• Cheong-Hee Chang ,

  Roles Conceptualization, Funding acquisition, Methodology, Resources, Writing – original draft, Writing – review & editing

  * E-mail: heechang@umich.edu (C-HC); ateles@umich.edu (AT); jmkidd@umich.edu (JMK)

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0001-8725-852X

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• Alice Telesnitsky ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Project administration, Validation, Writing – original draft, Writing – review & editing

  * E-mail: heechang@umich.edu (C-HC); ateles@umich.edu (AT); jmkidd@umich.edu (JMK)

  Affiliation Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0001-9878-5931

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• Jeffrey M. Kidd

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: heechang@umich.edu (C-HC); ateles@umich.edu (AT); jmkidd@umich.edu (JMK)

  Affiliation Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan, United States of America

  http://orcid.org/0000-0002-9631-1465

  ⨯