Comparison of intra- and inter-host genetic diversity in rabies virus during experimental cross-species transmission

• Emilie M. Bonnaud ,

  Contributed equally to this work with: Emilie M. Bonnaud, Cécile Troupin

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Institut Pasteur, Unit Lyssavirus Dynamics and Host Adaptation, WHO Collaborating Centre for Reference and Research on Rabies, Paris, France

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• Cécile Troupin ,

  Contributed equally to this work with: Emilie M. Bonnaud, Cécile Troupin

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Current address: Institut Pasteur de Guinée, Conakry, Guinea

  Affiliation Institut Pasteur, Unit Lyssavirus Dynamics and Host Adaptation, WHO Collaborating Centre for Reference and Research on Rabies, Paris, France

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• Laurent Dacheux,

  Roles Conceptualization, Data curation, Investigation, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Institut Pasteur, Unit Lyssavirus Dynamics and Host Adaptation, WHO Collaborating Centre for Reference and Research on Rabies, Paris, France

  http://orcid.org/0000-0002-4401-3706

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• Edward C. Holmes,

  Roles Conceptualization, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, The University of Sydney, Sydney, Australia

  http://orcid.org/0000-0001-9596-3552

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• Elodie Monchatre-Leroy,

  Roles Conceptualization, Data curation, Methodology, Supervision, Writing – review & editing

  Affiliation ANSES, Nancy Laboratory for Rabies and Wildlife, WHO Collaborating Centre for Research and Management in Zoonoses Control, OIE reference laboratory for rabies, European Union Reference Laboratory for rabies, European Union Reference Laboratory for rabies ser3ology, Malzéville, France

  http://orcid.org/0000-0002-3231-398X

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• Marion Tanguy,

  Roles Data curation, Formal analysis, Investigation, Writing – review & editing

  Affiliation Institut Pasteur, Unit Lyssavirus Dynamics and Host Adaptation, WHO Collaborating Centre for Reference and Research on Rabies, Paris, France

  http://orcid.org/0000-0002-3927-2228

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• Christiane Bouchier,

  Roles Data curation, Investigation, Methodology, Software, Writing – review & editing

  Affiliation Institut Pasteur, Genomics Platform, Paris, France

  http://orcid.org/0000-0003-3549-1543

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• Florence Cliquet,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Supervision, Writing – review & editing

  Affiliation ANSES, Nancy Laboratory for Rabies and Wildlife, WHO Collaborating Centre for Research and Management in Zoonoses Control, OIE reference laboratory for rabies, European Union Reference Laboratory for rabies, European Union Reference Laboratory for rabies ser3ology, Malzéville, France

  http://orcid.org/0000-0003-2237-1243

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• Jacques Barrat,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Writing – review & editing

  Affiliation ANSES, Nancy Laboratory for Rabies and Wildlife, WHO Collaborating Centre for Research and Management in Zoonoses Control, OIE reference laboratory for rabies, European Union Reference Laboratory for rabies, European Union Reference Laboratory for rabies ser3ology, Malzéville, France

  http://orcid.org/0000-0002-7426-0249

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• Hervé Bourhy

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: herve.bourhy@pasteur.fr

  Affiliation Institut Pasteur, Unit Lyssavirus Dynamics and Host Adaptation, WHO Collaborating Centre for Reference and Research on Rabies, Paris, France

  http://orcid.org/0000-0002-2608-5589

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