About the Authors

Madlen Stange

Contributed equally to this work with: Madlen Stange, Alfredo Mari, Tim Roloff, Helena MB Seth-Smith

Roles Data curation, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Swiss Institute for Bioinformatics, Basel, Switzerland

Alfredo Mari

Contributed equally to this work with: Madlen Stange, Alfredo Mari, Tim Roloff, Helena MB Seth-Smith

Roles Data curation, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Swiss Institute for Bioinformatics, Basel, Switzerland

Tim Roloff

Contributed equally to this work with: Madlen Stange, Alfredo Mari, Tim Roloff, Helena MB Seth-Smith

Roles Data curation, Formal analysis, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Swiss Institute for Bioinformatics, Basel, Switzerland

Helena MB Seth-Smith

Contributed equally to this work with: Madlen Stange, Alfredo Mari, Tim Roloff, Helena MB Seth-Smith

Roles Data curation, Investigation, Methodology, Software, Validation, Writing – original draft, Writing – review & editing

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Swiss Institute for Bioinformatics, Basel, Switzerland

Michael Schweitzer

Roles Data curation, Formal analysis, Investigation

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland

Myrta Brunner

Roles Formal analysis, Visualization, Writing – review & editing

Affiliation Human Geography, University of Basel, Basel, Switzerland

Karoline Leuzinger

Roles Resources, Writing – review & editing

Affiliations Clinical Virology, University Hospital Basel, Basel, Switzerland, Transplantation & Clinical Virology, Department of Biomedicine, University of Basel, Basel, Switzerland

Kirstine K. Søgaard

Roles Data curation, Investigation, Writing – review & editing

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland

Alexander Gensch

Roles Project administration, Resources, Writing – review & editing

Affiliation Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland

Sarah Tschudin-Sutter

Roles Resources, Writing – review & editing

Affiliation Infectious Diseases and Hospital Epidemiology, University Hospital Basel and University of Basel, Basel, Switzerland

Simon Fuchs

Roles Project administration, Resources, Writing – review & editing

Affiliation Health Services for the City of Basel, Basel, Switzerland

Julia Bielicki

Roles Project administration, Resources, Writing – review & editing

Affiliation Pediatric Infectious Diseases, University Children’s Hospital Basel, Basel, Switzerland

Hans Pargger

Roles Project administration, Resources, Writing – review & editing

Affiliation Intensive Care Unit, University Hospital Basel, Basel, Switzerland

Martin Siegemund

Roles Project administration, Resources, Writing – review & editing

Affiliation Intensive Care Unit, University Hospital Basel, Basel, Switzerland

Christian H. Nickel

Roles Project administration, Resources, Writing – review & editing

Affiliation Emergency Medicine, University Hospital Basel, Basel, Switzerland

Roland Bingisser

Roles Project administration, Resources, Writing – review & editing

Affiliation Emergency Medicine, University Hospital Basel, Basel, Switzerland

Michael Osthoff

Roles Project administration, Resources, Writing – review & editing

Affiliation Internal Medicine, University Hospital Basel, Basel, Switzerland

Stefano Bassetti

Roles Project administration, Resources, Writing – review & editing

Affiliation Internal Medicine, University Hospital Basel, Basel, Switzerland

Rita Schneider-Sliwa

Roles Project administration, Resources, Writing – review & editing

Affiliation Human Geography, University of Basel, Basel, Switzerland

Manuel Battegay

Roles Project administration, Resources, Writing – review & editing

Affiliation Infectious Diseases and Hospital Epidemiology, University Hospital Basel and University of Basel, Basel, Switzerland

Hans H. Hirsch

Roles Project administration, Resources, Writing – review & editing

Affiliations Clinical Virology, University Hospital Basel, Basel, Switzerland, Transplantation & Clinical Virology, Department of Biomedicine, University of Basel, Basel, Switzerland, Infectious Diseases and Hospital Epidemiology, University Hospital Basel and University of Basel, Basel, Switzerland

Adrian Egli

Roles Conceptualization, Data curation, Funding acquisition, Project administration, Supervision, Writing – original draft, Writing – review & editing

adrian.egli@usb.ch

Affiliations Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland

Competing Interests

The authors have declared that no competing interests exist.