About the Authors

Nicola F. Müller

Roles Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

nicola.felix.mueller@gmail.com (NFM); tanja.stadler@bsse.ethz.ch (TS)

Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland

Daniel Wüthrich

Roles Data curation, Validation, Writing – review & editing

Affiliations Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Nina Goldman

Roles Data curation

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Nadine Sailer

Roles Data curation, Writing – review & editing

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Claudia Saalfrank

Roles Data curation, Writing – review & editing

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Myrta Brunner

Roles Data curation, Writing – review & editing

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Noémi Augustin

Roles Data curation, Writing – review & editing

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Helena MB Seth-Smith

Roles Data curation, Validation, Writing – review & editing

Affiliations Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland, Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Yvonne Hollenstein

Roles Data curation, Writing – review & editing

Affiliations Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Mohammedyaseen Syedbasha

Roles Data curation, Writing – review & editing

Affiliations Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Daniela Lang

Roles Data curation, Writing – review & editing

Affiliations Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Richard A. Neher

Roles Methodology, Writing – review & editing

Affiliations Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland, Biozentrum, University of Basel, Basel, Switzerland

Olivier Dubuis

Roles Data curation, Writing – review & editing

Affiliation Viollier AG, Allschwil, Switzerland

Michael Naegele

Roles Data curation, Writing – review & editing

Affiliation Viollier AG, Allschwil, Switzerland

Andreas Buser

Roles Data curation, Writing – review & editing

Affiliation Regional Blood Transfusion Service, Swiss Red Cross, Basel, Switzerland

Christian H. Nickel

Roles Data curation, Writing – review & editing

Affiliation Emergency Department, University Hospital Basel, Basel, Switzerland

Nicole Ritz

Roles Data curation, Writing – review & editing

Affiliation Pediatric Infectious Diseases and Vaccinology, University Children’s Hospital Basel and University of Basel, Basel Switzerland

Andreas Zeller

Roles Data curation, Writing – review & editing

Affiliation Institute for Family Medicine, University of Basel, Basel, Switzerland

Brian M. Lang

Roles Formal analysis, Methodology, Software, Writing – review & editing

Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland

James Hadfield

Roles Formal analysis, Software, Visualization, Writing – review & editing

Affiliation Fred Hutchinson Cancer Research Center, Seattle, USA

Trevor Bedford

Roles Methodology, Writing – review & editing

Affiliation Fred Hutchinson Cancer Research Center, Seattle, USA

Manuel Battegay

Roles Conceptualization, Data curation, Funding acquisition, Methodology, Supervision, Writing – review & editing

Affiliations Department of Biomedicine, University of Basel, Basel, Switzerland, Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Basel, Switzerland

Rita Schneider-Sliwa

Roles Conceptualization, Funding acquisition, Methodology, Resources, Supervision, Writing – review & editing

Affiliation Human Geography, Department of Environmental Sciences, University of Basel, Basel, Switzerland

Adrian Egli

Contributed equally to this work with: Adrian Egli, Tanja Stadler

Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Writing – review & editing

Affiliations Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland, Department of Biomedicine, University of Basel, Basel, Switzerland

Tanja Stadler

Contributed equally to this work with: Adrian Egli, Tanja Stadler

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

nicola.felix.mueller@gmail.com (NFM); tanja.stadler@bsse.ethz.ch (TS)

Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics (SIB), Lausanne, Switzerland

Competing Interests

The authors have declared that no competing interests exist.