About the Authors

Sylvie Rato

Contributed equally to this work with: Sylvie Rato, Antonio Rausell

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Writing – original draft

‡ SR and AR are co-first authors on this work. AT and AC are co-last authors on this work.

Affiliation Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland

Antonio Rausell

Contributed equally to this work with: Sylvie Rato, Antonio Rausell

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Writing – original draft

‡ SR and AR are co-first authors on this work. AT and AC are co-last authors on this work.

Affiliations INSERM UMR 1163, Imagine Institute, Paris, France, Paris Descartes University–Sorbonne Paris Cité, Imagine Institute, Clinical Bioinformatics Lab, Paris, France

Miguel Muñoz

Roles Methodology

Affiliation Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland

Amalio Telenti

Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – original draft, Writing – review & editing

atelenti@jcvi.org (AT); Angela.Ciuffi@chuv.ch (AC)

‡ SR and AR are co-first authors on this work. AT and AC are co-last authors on this work.

Affiliation The J. Craig Venter Institute, La Jolla, California, United States of America

Angela Ciuffi

Roles Conceptualization, Funding acquisition, Investigation, Project administration, Supervision, Writing – original draft, Writing – review & editing

atelenti@jcvi.org (AT); Angela.Ciuffi@chuv.ch (AC)

‡ SR and AR are co-first authors on this work. AT and AC are co-last authors on this work.

Affiliation Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland

Competing Interests

The authors have declared that no competing interests exist.