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Transcriptome analysis

Transcriptome analysis of PDGFRα⁺ cells identifies T-type Ca²⁺ channel CACNA1G as a new pathological marker for PDGFRα⁺ cell hyperplasia

Se Eun Ha, Moon Young Lee, Masaaki Kurahashi, Lai Wei, Brian G. Jorgensen, Chanjae Park, Paul J. Park, Doug Redelman, Kent C. Sasse, Laren S. Becker, Kenton M. Sanders, Seungil Ro

published 14 Aug 2017

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Microbial profile comparisons of saliva, pooled and site-specific subgingival samples in periodontitis patients

Daniel Belstrøm, Maria Lynn Sembler-Møller, Maria Anastasia Grande, Nikolai Kirkby, Sean Liam Cotton, Bruce J. Paster, Palle Holmstrup

published 11 Aug 2017

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Identification of differentially expressed genes through RNA sequencing in goats (Capra hircus) at different postnatal stages

Yaqiu Lin, Jiangjiang Zhu, Yong Wang, Qian Li, Sen Lin

published 11 Aug 2017

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RNA-sequencing-based transcriptome and biochemical analyses of steroidal saponin pathway in a complete set of Allium fistulosum—A. cepa monosomic addition lines

Mostafa Abdelrahman, Magdi El-Sayed, Shusei Sato, Hideki Hirakawa, Shin-ichi Ito, Keisuke Tanaka, Yoko Mine, Nobuo Sugiyama, Minoru Suzuki, Naoki Yamauchi, Masayoshi Shigyo

published 11 Aug 2017

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Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice

Olusegun Oshota, Max Conway, Maria Fookes, Fernanda Schreiber, Roy R. Chaudhuri, Lu Yu, Fiona J. E. Morgan, Simon Clare, Jyoti Choudhary, Nicholas R. Thomson, Pietro Lio, Duncan J. Maskell, Pietro Mastroeni, Andrew J. Grant

published 10 Aug 2017

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Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data

Bo-Young Kim, Jung Hoon Park, Hye-Yeong Jo, Soo Kyung Koo, Mi-Hyun Park

published 09 Aug 2017

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Comparison of alternative approaches for analysing multi-level RNA-seq data

Irina Mohorianu, Amanda Bretman, Damian T. Smith, Emily K. Fowler, Tamas Dalmay, Tracey Chapman

published 08 Aug 2017

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Differential genomic arrangements in Caryophyllales through deep transcriptome sequencing of A. hypochondriacus

Meeta Sunil, Nivedita Hariharan, Shubham Dixit, Bibha Choudhary, Subhashini Srinivasan

published 07 Aug 2017

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Characterization of the genome of a phylogenetically distinct tospovirus and its interactions with the local lesion-induced host Chenopodium quinoa by whole-transcriptome analyses

Wan-Chen Chou, Shih-Shun Lin, Shyi-Dong Yeh, Siang-Ling Li, Ying-Che Peng, Ya-Hsu Fan, Tsung-Chi Chen

published 03 Aug 2017

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Differentially expressed genes in mycorrhized and nodulated roots of common bean are associated with defense, cell wall architecture, N metabolism, and P metabolism

Kalpana Nanjareddy, Manoj-Kumar Arthikala, Brenda-Mariana Gómez, Lourdes Blanco, Miguel Lara

published 03 Aug 2017

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The frontline of immune response in peripheral blood

Fuhai Song, Ying Qian, Xing Peng, Xiuhui Li, Peiqi Xing, Dongqing Ye, Hongxing Lei

published 03 Aug 2017

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De novo leaf and root transcriptome analysis to identify putative genes involved in triterpenoid saponins biosynthesis in Hedera helix L.

Huapeng Sun, Fang Li, Zijian Xu, Mengli Sun, Hanqing Cong, Fei Qiao, Xiaohong Zhong

published 03 Aug 2017

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Additional value of screening for minor genes and copy number variants in hypertrophic cardiomyopathy

Irene Mademont-Soler, Jesus Mates, Raquel Yotti, Maria Angeles Espinosa, Alexandra Pérez-Serra, Ana Isabel Fernandez-Avila, Monica Coll, Irene Méndez, Anna Iglesias, Bernat del Olmo, Helena Riuró, Sofía Cuenca, Catarina Allegue, Oscar Campuzano, Ferran Picó, Carles Ferrer-Costa, Patricia Álvarez, Sergio Castillo, Pablo Garcia-Pavia, Esther Gonzalez-Lopez, Laura Padron-Barthe, Aranzazu Díaz de Bustamante, María Teresa Darnaude, José Ignacio González-Hevia, Josep Brugada, Francisco Fernandez-Aviles, Ramon Brugada

published 03 Aug 2017

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