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Transcriptome analysis

Transcriptome-wide selection of a reliable set of reference genes for gene expression studies in potato cyst nematodes (Globodera spp.)

Michael Sabeh, Marc-Olivier Duceppe, Marc St-Arnaud, Benjamin Mimee

published 02 Mar 2018

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Comprehensive transcriptome analysis and flavonoid profiling of Ginkgo leaves reveals flavonoid content alterations in day–night cycles

Jun Ni, Lixiang Dong, Zhifang Jiang, Xiuli Yang, Ziying Chen, Yuhuan Wu, Maojun Xu

published 01 Mar 2018

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Full-length genome sequences of porcine epidemic diarrhoea virus strain CV777; Use of NGS to analyse genomic and sub-genomic RNAs

Thomas Bruun Rasmussen, Maria Beatrice Boniotti, Alice Papetti, Béatrice Grasland, Jean-Pierre Frossard, Akbar Dastjerdi, Marcel Hulst, Dennis Hanke, Anne Pohlmann, Sandra Blome, Wim H. M. van der Poel, Falko Steinbach, Yannick Blanchard, Antonio Lavazza, Anette Bøtner, Graham J. Belsham

published 01 Mar 2018

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PuLSE: Quality control and quantification of peptide sequences explored by phage display libraries

Steven Shave, Stefan Mann, Joanna Koszela, Alastair Kerr, Manfred Auer

published 23 Feb 2018

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Transcriptome analysis in different developmental stages of Batocera horsfieldi (Coleoptera: Cerambycidae) and comparison of candidate olfactory genes

Hua Yang, Yan Cai, Zhihang Zhuo, Wei Yang, Chunping Yang, Jin Zhang, Yang Yang, Baoxin Wang, Fengrong Guan

published 23 Feb 2018

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Genome-wide identification and analysis of A-to-I RNA editing events in bovine by transcriptome sequencing

Mohammad Reza Bakhtiarizadeh, Abdolreza Salehi, Rocío Melissa Rivera

published 22 Feb 2018

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Involvement of an ABI-like protein and a Ca²⁺-ATPase in drought tolerance as revealed by transcript profiling of a sweetpotato somatic hybrid and its parents Ipomoea batatas (L.) Lam. and I. triloba L.

Yufeng Yang, Yannan Wang, Licong Jia, Guohong Yang, Xinzhi Xu, Hong Zhai, Shaozhen He, Junxia Li, Xiaodong Dai, Na Qin, Cancan Zhu, Qingchang Liu

published 21 Feb 2018

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Improving stability of prediction models based on correlated omics data by using network approaches

Renaud Tissier, Jeanine Houwing-Duistermaat, Mar Rodríguez-Girondo

published 20 Feb 2018

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Functional characterization and genomic studies of a novel murine submandibular gland epithelial cell line

Sangwon Min, Eun-Ah Christine Song, Akinsola Oyelakin, Christian Gluck, Kirsten Smalley, Rose-Anne Romano

published 20 Feb 2018

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A hybrid gene selection approach to create the S1500+ targeted gene sets for use in high-throughput transcriptomics

Deepak Mav, Ruchir R. Shah, Brian E. Howard, Scott S. Auerbach, Pierre R. Bushel, Jennifer B. Collins, David L. Gerhold, Richard S. Judson, Agnes L. Karmaus, Elizabeth A. Maull, Donna L. Mendrick, B. Alex Merrick, Nisha S. Sipes, Daniel Svoboda, Richard S. Paules

published 20 Feb 2018

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Microbial diversity and component variation in Xiaguan Tuo Tea during pile fermentation

Haizhou Li, Min Li, Xinrui Yang, Xin Gui, Guofeng Chen, Jiuyun Chu, Xingwang He, Weitao Wang, Feng Han, Ping Li

published 20 Feb 2018

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Selective identification of somatic mutations in pancreatic cancer cells through a combination of next-generation sequencing of plasma DNA using molecular barcodes and a bioinformatic variant filter

Yoji Kukita, Kazuyoshi Ohkawa, Ryoji Takada, Hiroyuki Uehara, Kazuhiro Katayama, Kikuya Kato

published 16 Feb 2018

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De novo transcriptomic analysis of leaf and fruit tissue of Cornus officinalis using Illumina platform

Dian-Yun Hou, Lin-Chun Shi, Meng-Meng Yang, Jiong Li, Shuang Zhou, Hong-Xiao Zhang, Hua-Wei Xu

published 16 Feb 2018

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