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Transcriptome analysis

Comparative evaluation of a new magnetic bead-based DNA extraction method from fecal samples for downstream next-generation 16S rRNA gene sequencing

Kara D. McGaughey, Tulay Yilmaz-Swenson, Nourhan M. Elsayed, Dianne A. Cruz, Ramona R. Rodriguez, Michael D. Kritzer, Angel V. Peterchev, Megan Gray, Samantha R. Lewis, Jeffrey Roach, William C. Wetsel, Douglas E. Williamson

published 23 Aug 2018

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De novo transcriptomic analysis of the alimentary tract of the tephritid gall fly, Procecidochares utilis

Lifang Li, Mingxian Lan, Wufeng Lu, Zhaobo Li, Tao Xia, Jiaying Zhu, Min Ye, Xi Gao, Guoxing Wu

published 23 Aug 2018

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High-throughput SSR marker development and its application in a centipedegrass (Eremochloa ophiuroides (Munro) Hack.) genetic diversity analysis

Jianjian Li, Hailin Guo, Yi Wang, Junqin Zong, Jingbo Chen, Dandan Li, Ling Li, Jingjing Wang, Jianxiu Liu

published 22 Aug 2018

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The early transcriptome response of cassava (Manihot esculenta Crantz) to mealybug (Phenacoccus manihoti) feeding

Molemi E. Rauwane, Damaris A. Odeny, Ian Millar, Chrissie Rey, Jasper Rees

published 22 Aug 2018

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Clinical reassessment of human embryo ploidy status between cleavage and blastocyst stage by Next Generation Sequencing

Alberto Liñán, Barbara Lawrenz, Ibrahim El Khatib, Asina Bayram, Ana Arnanz, Carmen Rubio, Rupali Chopra, Human M. Fatemi

published 22 Aug 2018

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Sequencing of Treponema pallidum subsp. pallidum from isolate UZ1974 using Anti-Treponemal Antibodies Enrichment: First complete whole genome sequence obtained directly from human clinical material

Linda Grillová, Lorenzo Giacani, Lenka Mikalová, Michal Strouhal, Radim Strnadel, Christina Marra, Arturo Centurion-Lara, Lucy Poveda, Giancarlo Russo, Darina Čejková, Vladimír Vašků, Jan Oppelt, David Šmajs

published 21 Aug 2018

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Orthologous proteins of experimental de- and remyelination are differentially regulated in the CSF proteome of multiple sclerosis subtypes

Nellie A. Martin, Arkadiusz Nawrocki, Viktor Molnar, Maria L. Elkjaer, Eva K. Thygesen, Miklos Palkovits, Peter Acs, Tobias Sejbaek, Helle H. Nielsen, Zoltan Hegedus, Finn Sellebjerg, Tihamer Molnar, Eudes G. V. Barbosa, Nicolas Alcaraz, Ferenc Gallyas Jr., Asa F. Svenningsen, Jan Baumbach, Hans Lassmann, Martin R. Larsen, Zsolt Illes

published 16 Aug 2018

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iMapSplice: Alleviating reference bias through personalized RNA-seq alignment

Xinan Liu, James N. MacLeod, Jinze Liu

published 10 Aug 2018

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Characterization of candidate genes involved in halotolerance using high-throughput omics in the halotolerant bacterium Virgibacillus chiguensis

Yan-Huey Chen, Yuan-Tay Shyu, Shih-Shun Lin

published 09 Aug 2018

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Transcriptome sequencing and ITRAQ reveal the detoxification mechanism of Bacillus GJ1, a potential biocontrol agent for Huanglongbing

Jizhou TANG, Yuanxi DING, Jing Nan, Xiangyu YANG, Liang SUN, Xiuyun ZHAO, Ling JIANG

published 09 Aug 2018

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Cranberry-derived proanthocyanidins induce a differential transcriptomic response within Candida albicans urinary biofilms

Anitha Sundararajan, Hallie S. Rane, Thiruvarangan Ramaraj, Johnny Sena, Amy B. Howell, Stella M. Bernardo, Faye D. Schilkey, Samuel A. Lee

published 08 Aug 2018

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Evaluating freshwater macroinvertebrates from eDNA metabarcoding: A river Nalón case study

Sara Fernández, Saúl Rodríguez, Jose L. Martínez, Yaisel J. Borrell, Alba Ardura, Eva García-Vázquez

published 08 Aug 2018

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The transcriptome of the Bermuda fireworm Odontosyllis enopla (Annelida: Syllidae): A unique luciferase gene family and putative epitoky-related genes

Mercer R. Brugler, M. Teresa Aguado, Michael Tessler, Mark E. Siddall

published 08 Aug 2018

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