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Transcriptome analysis

Genome-wide identification and analysis of A-to-I RNA editing events in bovine by transcriptome sequencing

Mohammad Reza Bakhtiarizadeh, Abdolreza Salehi, Rocío Melissa Rivera

published 22 Feb 2018

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Involvement of an ABI-like protein and a Ca²⁺-ATPase in drought tolerance as revealed by transcript profiling of a sweetpotato somatic hybrid and its parents Ipomoea batatas (L.) Lam. and I. triloba L.

Yufeng Yang, Yannan Wang, Licong Jia, Guohong Yang, Xinzhi Xu, Hong Zhai, Shaozhen He, Junxia Li, Xiaodong Dai, Na Qin, Cancan Zhu, Qingchang Liu

published 21 Feb 2018

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Improving stability of prediction models based on correlated omics data by using network approaches

Renaud Tissier, Jeanine Houwing-Duistermaat, Mar Rodríguez-Girondo

published 20 Feb 2018

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Functional characterization and genomic studies of a novel murine submandibular gland epithelial cell line

Sangwon Min, Eun-Ah Christine Song, Akinsola Oyelakin, Christian Gluck, Kirsten Smalley, Rose-Anne Romano

published 20 Feb 2018

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A hybrid gene selection approach to create the S1500+ targeted gene sets for use in high-throughput transcriptomics

Deepak Mav, Ruchir R. Shah, Brian E. Howard, Scott S. Auerbach, Pierre R. Bushel, Jennifer B. Collins, David L. Gerhold, Richard S. Judson, Agnes L. Karmaus, Elizabeth A. Maull, Donna L. Mendrick, B. Alex Merrick, Nisha S. Sipes, Daniel Svoboda, Richard S. Paules

published 20 Feb 2018

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Microbial diversity and component variation in Xiaguan Tuo Tea during pile fermentation

Haizhou Li, Min Li, Xinrui Yang, Xin Gui, Guofeng Chen, Jiuyun Chu, Xingwang He, Weitao Wang, Feng Han, Ping Li

published 20 Feb 2018

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Selective identification of somatic mutations in pancreatic cancer cells through a combination of next-generation sequencing of plasma DNA using molecular barcodes and a bioinformatic variant filter

Yoji Kukita, Kazuyoshi Ohkawa, Ryoji Takada, Hiroyuki Uehara, Kazuhiro Katayama, Kikuya Kato

published 16 Feb 2018

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De novo transcriptomic analysis of leaf and fruit tissue of Cornus officinalis using Illumina platform

Dian-Yun Hou, Lin-Chun Shi, Meng-Meng Yang, Jiong Li, Shuang Zhou, Hong-Xiao Zhang, Hua-Wei Xu

published 16 Feb 2018

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Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories

Matthew C. Hale, Garrett J. McKinney, Frank P. Thrower, Krista M. Nichols

published 15 Feb 2018

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Species-specific regulation of angiogenesis by glucocorticoids reveals contrasting effects on inflammatory and angiogenic pathways

Ruth Morgan, John Keen, Daniel Halligan, Alan O’Callaghan, Ruth Andrew, Dawn Livingstone, Amber Abernethie, Giorgia Maltese, Brian Walker, Patrick Hadoke

published 15 Feb 2018

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A tale of two mixotrophic chrysophytes: Insights into the metabolisms of two Ochromonas species (Chrysophyceae) through a comparison of gene expression

Alle A. Y. Lie, Zhenfeng Liu, Ramon Terrado, Avery O. Tatters, Karla B. Heidelberg, David A. Caron

published 13 Feb 2018

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Adaptability of the Saccharomyces cerevisiae yeasts to wine fermentation conditions relies on their strong ability to consume nitrogen

Claire Brice, Francisco A. Cubillos, Sylvie Dequin, Carole Camarasa, Claudio Martínez

published 12 Feb 2018

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De novo transcriptome analysis of Bagarius yarrelli (Siluriformes: Sisoridae) and the search for potential SSR markers using RNA-Seq

Min Du, Na Li, Baozhen Niu, Yanhong Liu, Dongjing You, Defu Jiang, Congquan Ruan, Zhengquan Qin, Taowen Song, Wentao Wang

published 09 Feb 2018

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