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Transcriptome analysis

Evaluating freshwater macroinvertebrates from eDNA metabarcoding: A river Nalón case study

Sara Fernández, Saúl Rodríguez, Jose L. Martínez, Yaisel J. Borrell, Alba Ardura, Eva García-Vázquez

published 08 Aug 2018

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The transcriptome of the Bermuda fireworm Odontosyllis enopla (Annelida: Syllidae): A unique luciferase gene family and putative epitoky-related genes

Mercer R. Brugler, M. Teresa Aguado, Michael Tessler, Mark E. Siddall

published 08 Aug 2018

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Combination of a six microRNA expression profile with four clinicopathological factors for response prediction of systemic treatment in patients with advanced colorectal cancer

Maarten Neerincx, Dennis Poel, Daoud L. S. Sie, Nicole C. T. van Grieken, Ram C. Shankaraiah, Floor S. W. van der Wolf - de Lijster, Jan-Hein T. M. van Waesberghe, Jan-Dirk Burggraaf, Paul P. Eijk, Cornelis Verhoef, Bauke Ylstra, Gerrit A. Meijer, Mark A. van de Wiel, Tineke E. Buffart, Henk M. W. Verheul

published 03 Aug 2018

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Transcriptional analysis of viral mRNAs reveals common transcription patterns in cells infected by five different filoviruses

César G. Albariño, Lisa Wiggleton Guerrero, Ayan K. Chakrabarti, Stuart T. Nichol

published 02 Aug 2018

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Parental high dietary arachidonic acid levels modulated the hepatic transcriptome of adult zebrafish (Danio rerio) progeny

Anne-Catrin Adam, Kaja Helvik Skjærven, Paul Whatmore, Mari Moren, Kai Kristoffer Lie

published 02 Aug 2018

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Studying on the strictly self-compatibility mechanism of ‘Liuyefeitao’ peach (Prunus persica L.)

Wei Liu, Maosong Pei, Anning Zhang

published 01 Aug 2018

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An overview of Phoneutria nigriventer spider venom using combined transcriptomic and proteomic approaches

Marcelo R. V. Diniz, Ana L. B. Paiva, Clara Guerra-Duarte, Milton Y. Nishiyama Jr, Mauricio A. Mudadu, Ursula de Oliveira, Márcia H. Borges, John R. Yates, Inácio de L. Junqueira-de-Azevedo

published 01 Aug 2018

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HSRA: Hadoop-based spliced read aligner for RNA sequencing data

Roberto R. Expósito, Jorge González-Domínguez, Juan Touriño

published 31 Jul 2018

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Detection of new pathways involved in the acceptance and the utilisation of a plant-based diet in isogenic lines of rainbow trout fry

Thérèse Callet, Mathilde Dupont-Nivet, Marianne Cluzeaud, Florence Jaffrezic, Denis Laloë, Thierry Kerneis, Laurent Labbé, Edwige Quillet, Inge Geurden, David Mazurais, Sandrine Skiba-Cassy, Françoise Médale

published 31 Jul 2018

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Automated size selection for short cell-free DNA fragments enriches for circulating tumor DNA and improves error correction during next generation sequencing

Sabine Hellwig, David A. Nix, Keith M. Gligorich, John M. O’Shea, Alun Thomas, Carrie L. Fuertes, Preetida J. Bhetariya, Gabor T. Marth, Mary P. Bronner, Hunter R. Underhill

published 25 Jul 2018

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Investigation of epigenetic regulatory networks associated with autism spectrum disorder (ASD) by integrated global LINE-1 methylation and gene expression profiling analyses

Chayanin Tangsuwansri, Thanit Saeliw, Surangrat Thongkorn, Weerasak Chonchaiya, Kanya Suphapeetiporn, Apiwat Mutirangura, Tewin Tencomnao, Valerie Wailin Hu, Tewarit Sarachana

published 23 Jul 2018

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An annotated CNS transcriptome of the medicinal leech, Hirudo verbana: De novo sequencing to characterize genes associated with nervous system activity

Adam J. Northcutt, Eva K. Fischer, Joshua G. Puhl, Karen A. Mesce, David J. Schulz

published 20 Jul 2018

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Identification of a putative polyketide synthase gene involved in usnic acid biosynthesis in the lichen Nephromopsis pallescens

Yi Wang, Changan Geng, Xiaolong Yuan, Mei Hua, Fenghua Tian, Changtian Li

published 18 Jul 2018

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