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Transcriptome analysis

Within species expressed genetic variability and gene expression response to different temperatures in the rotifer Brachionus calyciflorus sensu stricto

Sofia Paraskevopoulou, Alice B. Dennis, Guntram Weithoff, Stefanie Hartmann, Ralph Tiedemann

published 30 Sep 2019

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A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata

Emily Telfer, Natalie Graham, Lucy Macdonald, Yongjun Li, Jaroslav Klápště, Marcio Resende Jr, Leandro Gomide Neves, Heidi Dungey, Phillip Wilcox

published 30 Sep 2019

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Transcriptomic changes triggered by ouabain in rat cerebellum granule cells: Role of α3- and α1-Na⁺,K⁺-ATPase-mediated signaling

Larisa V. Smolyaninova, Alexandra A. Shiyan, Leonid V. Kapilevich, Alexander V. Lopachev, Tatiana N. Fedorova, Tatiana S. Klementieva, Aleksey A. Moskovtsev, Aslan A. Kubatiev, Sergei N. Orlov

published 26 Sep 2019

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Identification and evolutionary characterization of salt-responsive transcription factors in the succulent halophyte Suaeda fruticosa

Joann Diray-Arce, Alisa Knowles, Anton Suvorov, Jacob O’Brien, Collin Hansen, Seth M. Bybee, Bilquees Gul, M. Ajmal Khan, Brent L. Nielsen

published 23 Sep 2019

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Variant analysis pipeline for accurate detection of genomic variants from transcriptome sequencing data

Modupeore O. Adetunji, Susan J. Lamont, Behnam Abasht, Carl J. Schmidt

published 23 Sep 2019

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PBMCs transcriptome profiles identified breed-specific transcriptome signatures for PRRSV vaccination in German Landrace and Pietrain pigs

Md. Aminul Islam, Christiane Neuhoff, Sharmin Aqter Rony, Christine Große-Brinkhaus, Muhammad Jasim Uddin, Michael Hölker, Dawit Tesfaye, Ernst Tholen, Karl Schellander, Maren Julia Pröll-Cornelissen

published 19 Sep 2019

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NGS analysis in Marfan syndrome spectrum: Combination of rare and common genetic variants to improve genotype-phenotype correlation analysis

Davide Gentilini, Antonino Oliveri, Teresa Fazia, Alessandro Pini, Susan Marelli, Luisa Bernardinelli, Anna Maria Di Blasio

published 19 Sep 2019

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PCR-free whole exome sequencing: Cost-effective and efficient in detecting rare mutations

Izumi Yamaguchi, Takashi Watanabe, Osamu Ohara, Yoshinori Hasegawa

published 13 Sep 2019

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Irisin promotes C2C12 myoblast proliferation via ERK-dependent CCL7 upregulation

Jangho Lee, Joon Park, Young Ho Kim, Nam Hyouck Lee, Kyung-Mo Song

published 13 Sep 2019

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False-negative errors in next-generation sequencing contribute substantially to inconsistency of mutation databases

Young-Ho Kim, Yura Song, Jong-Kwang Kim, Tae-Min Kim, Hye Won Sim, Hyung-Lae Kim, Hyonchol Jang, Young-Woo Kim, Kyeong-Man Hong

published 12 Sep 2019

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Genomic characterization of the complete terpene synthase gene family from Cannabis sativa

Keith D. Allen, Kevin McKernan, Christopher Pauli, Jim Roe, Anthony Torres, Reggie Gaudino

published 12 Sep 2019

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Quantitative detection of ALK fusion breakpoints in plasma cell-free DNA from patients with non-small cell lung cancer using PCR-based target sequencing with a tiling primer set and two-step mapping/alignment

Kei Kunimasa, Kikuya Kato, Fumio Imamura, Yoji Kukita

published 12 Sep 2019

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Transcriptome divergence during leaf development in two contrasting switchgrass (Panicum virgatum L.) cultivars

Nathan A. Palmer, R. V. Chowda-Reddy, Anthony A. Muhle, Satyanarayana Tatineni, Gary Yuen, Serge J. Edmé, Robert B. Mitchell, Gautam Sarath

published 12 Sep 2019

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