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Transcriptome analysis

AFLP-AFLP in silico-NGS approach reveals polymorphisms in repetitive elements in the malignant genome

Jitka Koblihova, Klara Srutova, Monika Krutska, Hana Klamova, Katerina Machova Polakova

published 08 Nov 2018

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Transcriptome profiling of transgenic potato plants provides insights into variability caused by plant transformation

Dae Kwan Ko, Satya Swathi Nadakuduti, David S. Douches, C. Robin Buell

published 08 Nov 2018

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Examining the role of the surfactant family member SFTA3 in interneuron specification

Christopher Y. Chen, Nickesha C. Anderson, Sandy Becker, Martin Schicht, Christopher Stoddard, Lars Bräuer, Friedrich Paulsen, Laura Grabel

published 08 Nov 2018

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Integrated transcriptome and hormone profiling highlight the role of multiple phytohormone pathways in wheat resistance against fusarium head blight

Lipu Wang, Qiang Li, Ziying Liu, Anu Surendra, Youlian Pan, Yifeng Li, L. Irina Zaharia, Thérèse Ouellet, Pierre R. Fobert

published 07 Nov 2018

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PRY-1/Axin signaling regulates lipid metabolism in Caenorhabditis elegans

Ayush Ranawade, Avijit Mallick, Bhagwati P. Gupta

published 07 Nov 2018

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Transcriptome profile analysis of leg muscle tissues between slow- and fast-growing chickens

Pengfei Wu, Guojun Dai, Fuxiang Chen, Lan Chen, Tao Zhang, Kaizhou Xie, Jinyu Wang, Genxi Zhang

published 07 Nov 2018

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Comparative transcriptomics identifies genes differentially expressed in the intestine of a new fast-growing strain of common carp with higher unsaturated fatty acid content in muscle

Chengfeng Zhang, Shengyan Su, Xinyuan Li, Bing Li, Baojuan Yang, Jian Zhu, Weimin Wang

published 05 Nov 2018

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TRCMGene: A two-step referential compression method for the efficient storage of genetic data

You Tang, Min Li, Jing Sun, Tao Zhang, Jicheng Zhang, Ping Zheng

published 05 Nov 2018

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Approaches to variant discovery for conifer transcriptome sequencing

Emily Telfer, Natalie Graham, Lucy Macdonald, Shane Sturrock, Phillip Wilcox, Lisa Stanbra

published 05 Nov 2018

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De novo assembly of wheat root transcriptomes and transcriptional signature of longitudinal differentiation

Ghana Shyam Challa, Wanlong Li

published 05 Nov 2018

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Regularization and grouping -omics data by GCA method: A transcriptomic case

Monika Piwowar, Kinga A. Kocemba-Pilarczyk, Piotr Piwowar

published 01 Nov 2018

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Next-Generation Sequencing and Quantitative Proteomics of Hutchinson-Gilford progeria syndrome-derived cells point to a role of nucleotide metabolism in premature aging

Jesús Mateos, Juan Fafián-Labora, Miriam Morente-López, Iván Lesende-Rodriguez, Lorenzo Monserrat, María A. Ódena, Eliandre de Oliveira, Javier de Toro, María C. Arufe

published 31 Oct 2018

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De novo transcriptome based on next-generation sequencing reveals candidate genes with sex-specific expression in Arapaima gigas (Schinz, 1822), an ancient Amazonian freshwater fish

Luciana Watanabe, Fátima Gomes, João Vianez, Márcio Nunes, Jedson Cardoso, Clayton Lima, Horacio Schneider, Iracilda Sampaio

published 29 Oct 2018

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