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Transcriptome analysis

A user-friendly platform for yeast two-hybrid library screening using next generation sequencing

Marie-Laure Erffelinck, Bianca Ribeiro, Maria Perassolo, Laurens Pauwels, Jacob Pollier, Veronique Storme, Alain Goossens

published 21 Dec 2018

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Identification of appropriate reference genes for RT-qPCR analysis in Juglans regia L.

Li Zhou, Jianxin Niu, Shaowen Quan

published 18 Dec 2018

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Sugarcane apoplast fluid modulates the global transcriptional profile of the diazotrophic bacteria Paraburkholderia tropica strain Ppe8

Paula Renata Alves da Silva, Márcia Soares Vidal, Cleiton de Paula Soares, Valéria Polese, Michelle Zibetti Tadra-Sfeir, Emanuel Maltempi de Souza, Jean Luiz Simões-Araújo, José Ivo Baldani

published 14 Dec 2018

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Gene network analysis of poplar root transcriptome in response to drought stress identifies a PtaJAZ3PtaRAP2.6-centered hierarchical network

Madhumita Dash, Yordan S. Yordanov, Tatyana Georgieva, Hairong Wei, Victor Busov

published 12 Dec 2018

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Gene expression is implicated in the ability of pikas to occupy Himalayan elevational gradient

Katherine A. Solari, Uma Ramakrishnan, Elizabeth A. Hadly

published 12 Dec 2018

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De novo transcriptome assembly of the Chinese pearl barley, adlay, by full-length isoform and short-read RNA sequencing

Sang-Ho Kang, Jong-Yeol Lee, Tae-Ho Lee, Soo-Yun Park, Chang-Kug Kim

published 11 Dec 2018

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Genome-wide identification and functional analysis of circRNAs in Zea mays

Baihua Tang, Zhiqiang Hao, Yanfeng Zhu, Hua Zhang, Guanglin Li

published 11 Dec 2018

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Comparative transcriptome analysis provides insights into dwarfism in cherry tomato (Solanum lycopersicum var. cerasiforme)

Md Abdur Rahim, Hee-Jeong Jung, Khandker Shazia Afrin, Ji-Hee Lee, Ill-Sup Nou

published 07 Dec 2018

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Transcriptomic analysis of Lycium ruthenicum Murr. during fruit ripening provides insight into structural and regulatory genes in the anthocyanin biosynthetic pathway

Yan-Jun Ma, Hui-Rong Duan, Feng Zhang, Yi Li, Hong-Shan Yang, Fu-Ping Tian, Xue-Hui Zhou, Chun-Mei Wang, Rui Ma

published 07 Dec 2018

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Transcriptome-wide responses of adult melon thrips (Thrips palmi) associated with capsicum chlorosis virus infection

Shirani M. K. Widana Gamage, Dorith Rotenberg, Derek J. Schneweis, Chi-Wei Tsai, Ralf G. Dietzgen

published 07 Dec 2018

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De novo transcriptome sequencing and SSR markers development for Cedrela balansae C.DC., a native tree species of northwest Argentina

Susana L. Torales, Máximo Rivarola, Sergio Gonzalez, María Virginia Inza, María F. Pomponio, Paula Fernández, Cintia V. Acuña, Noga Zelener, Luis Fornés, H. Esteban Hopp, Norma B. Paniego, Susana N. Marcucci Poltri

published 07 Dec 2018

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Rapid and highly-specific generation of targeted DNA sequencing libraries enabled by linking capture probes with universal primers

Joel Pel, Amy Leung, Wendy W. Y. Choi, Milenko Despotovic, W. Lloyd Ung, Gosuke Shibahara, Laura Gelinas, Andre Marziali

published 05 Dec 2018

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Hypervirulent group A Streptococcus emergence in an acaspular background is associated with marked remodeling of the bacterial cell surface

Jessica Galloway-Peña, Sruti DebRoy, Chelcy Brumlow, Xiqi Li, Truc T. Tran, Nicola Horstmann, Hui Yao, Ken Chen, Fang Wang, Bih-Fang Pan, David H. Hawke, Erika J. Thompson, Cesar A. Arias, Vance G. Fowler Jr., Micah M. Bhatti, Awdhesh Kalia, Anthony R. Flores, Samuel A. Shelburne

published 05 Dec 2018

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