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Transcriptome analysis

Validation of publicly-available software used in analyzing NGS data for HIV-1 drug resistance mutations and transmission networks in a Washington, DC, Cohort

Kamwing Jair, Chase D. McCann, Harrison Reed, Amanda D. Castel, Marcos Pérez-Losada, Brittany Wilbourn, Alan E. Greenberg, Jeanne A. Jordan, the DC Cohort Executive Committee

published 09 Apr 2019

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Screening of the candidate genes related to low-temperature tolerance of Fenneropenaeus chinensis based on high-throughput transcriptome sequencing

Xianhong Meng, Lijun Dong, Xiaoli Shi, Xupeng Li, Juan Sui, Kun Luo, Sheng Luan, Baolong Chen, Baoxiang Cao, Jiawang Cao, Jie Kong

published 08 Apr 2019

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Rhodnius prolixus: Identification of missing components of the IMD immune signaling pathway and functional characterization of its role in eliminating bacteria

Nicolas Salcedo-Porras, Alessandra Guarneri, Pedro L. Oliveira, Carl Lowenberger

published 03 Apr 2019

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Fragmentation Through Polymerization (FTP): A new method to fragment DNA for next-generation sequencing

Konstantin B. Ignatov, Konstantin A. Blagodatskikh, Dmitry S. Shcherbo, Tatiana V. Kramarova, Yulia A. Monakhova, Vladimir M. Kramarov

published 01 Apr 2019

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Effect of fasting and subsequent refeeding on the transcriptional profiles of brain in juvenile Spinibarbus hollandi

Yang Yang, Huiqiang Zhou, Hu Shu, Dongming Zhong, Mingqing Zhang, Jun Hong Xia

published 28 Mar 2019

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Phenotypic subgrouping and multi-omics analyses reveal reduced diazepam-binding inhibitor (DBI) protein levels in autism spectrum disorder with severe language impairment

Chatravee Pichitpunpong, Surangrat Thongkorn, Songphon Kanlayaprasit, Wasana Yuwattana, Waluga Plaingam, Siriporn Sangsuthum, Wan Mohd Aizat, Syarul Nataqain Baharum, Tewin Tencomnao, Valerie Wailin Hu, Tewarit Sarachana

published 28 Mar 2019

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Genome-wide mining seed-specific candidate genes from peanut for promoter cloning

Cuiling Yuan, Quanxi Sun, Yingzhen Kong

published 28 Mar 2019

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Construction of a high-density interspecific (Lens culinaris x L. odemensis) genetic map based on functional markers for mapping morphological and agronomical traits, and QTLs affecting resistance to Ascochyta in lentil

Carlos Polanco, Luis Enrique Sáenz de Miera, Ana Isabel González, Pedro García, Richard Fratini, Francisca Vaquero, Francisco Javier Vences, Marcelino Pérez de la Vega

published 27 Mar 2019

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Transcriptome analysis reveals important candidate genes involved in grain-size formation at the stage of grain enlargement in common wheat cultivar “Bainong 4199”

Yuanyuan Guan, Gan Li, Zongli Chu, Zhengang Ru, Xiaoling Jiang, Zhaopu Wen, Guang Zhang, Yuquan Wang, Yang Zhang, Wenhui Wei

published 25 Mar 2019

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Baseline identification of clonal V(D)J sequences for DNA-based minimal residual disease detection in multiple myeloma

Even H. Rustad, Malin Hultcrantz, Venkata D. Yellapantula, Theresia Akhlaghi, Caleb Ho, Maria E. Arcila, Mikhail Roshal, Akshar Patel, Denise Chen, Sean M. Devlin, Austin Jacobsen, Ying Huang, Jeffrey E. Miller, Elli Papaemmanuil, Ola Landgren

published 22 Mar 2019

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The transcriptome analysis of Protaetia brevitarsis Lewis larvae

Zhongjie Li, Miaomiao Meng, Shasha Li, Bo Deng

published 21 Mar 2019

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Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing

Jerome Bouquet, Tony Li, Jennifer L. Gardy, Xiaoying Kang, Staci Stevens, Jared Stevens, Mark VanNess, Christopher Snell, James Potts, Ruth R. Miller, Muhammad Morshed, Mark McCabe, Shoshana Parker, Miguel Uyaguari, Patrick Tang, Theodore Steiner, Wee-Shian Chan, Astrid-Marie De Souza, Andre Mattman, David M. Patrick, Charles Y. Chiu

published 21 Mar 2019

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A novel transcriptome-derived SNPs array for tench (Tinca tinca L.)

Girish Kumar, Jorge Langa, Iratxe Montes, Darrell Conklin, Martin Kocour, Klaus Kohlmann, Andone Estonba

published 19 Mar 2019

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