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Transcriptome analysis

EasyParallel: A GUI platform for parallelization of STRUCTURE and NEWHYBRIDS analyses

Honggang Zhao, Benjamin Beck, Adam Fuller, Eric Peatman

published 24 Apr 2020

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Retinal astrocytes transcriptome reveals Cyp1b1 regulates the expression of genes involved in cell adhesion and migration

Juliana Falero-Perez, Christine M. Sorenson, Nader Sheibani

published 24 Apr 2020

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Identification of differential expression genes related to anthocyanin biosynthesis in carmine radish (Raphanus sativus L.) fleshy roots using comparative RNA-Seq method

Jian Gao, Wen-Bo Li, Hong-Fang Liu, Fa-Bo Chen

published 24 Apr 2020

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Performance of a multiplexed amplicon-based next-generation sequencing assay for HLA typing

Chang Liu, Brian F. Duffy, Eric T. Weimer, Maureen C. Montgomery, Jo-Ellen Jennemann, Rachel Hill, Donna Phelan, Lindsay Lay, Bijal A. Parikh

published 23 Apr 2020

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Phytoplankton transcriptomic and physiological responses to fixed nitrogen in the California current system

Irina N. Shilova, Jonathan D. Magasin, Matthew M. Mills, Julie C. Robidart, Kendra A. Turk-Kubo, Jonathan P. Zehr

published 20 Apr 2020

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Transcriptomic analysis of polyketide synthases in a highly ciguatoxic dinoflagellate, Gambierdiscus polynesiensis and low toxicity Gambierdiscus pacificus, from French Polynesia

Frances M. Van Dolah, Jeanine S. Morey, Shard Milne, André Ung, Paul E. Anderson, Mireille Chinain

published 15 Apr 2020

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Detection of microbial cell-free DNA in maternal and umbilical cord plasma in patients with chorioamnionitis using next generation sequencing

Russell G. Witt, Lily Blair, Michela Frascoli, Michael J. Rosen, Quoc-Hung Nguyen, Sivan Bercovici, Simona Zompi, Roberto Romero, Tippi C. Mackenzie

published 15 Apr 2020

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CCNB2 and AURKA overexpression may cause atypical mitosis in Japanese cortisol-producing adrenocortical carcinoma with TP53 somatic variant

Akira Ikeya, Mitsuko Nakashima, Miho Yamashita, Keisuke Kakizawa, Yuta Okawa, Hirotomo Saitsu, Shigekazu Sasaki, Hironobu Sasano, Takafumi Suda, Yutaka Oki

published 14 Apr 2020

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Lipidomic study of cell lines reveals differences between breast cancer subtypes

Finnur Freyr Eiriksson, Martha Kampp Nøhr, Margarida Costa, Sigridur Klara Bödvarsdottir, Helga Margret Ögmundsdottir, Margret Thorsteinsdottir

published 14 Apr 2020

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Mechanistic molecular responses of the giant clam Tridacna crocea to Vibrio coralliilyticus challenge

Duo Xu, Zehui Zhao, Zihua Zhou, Yue Lin, Xiangyu Zhang, Yang Zhang, Yuehuan Zhang, Jun li, Fan Mao, Shu Xiao, Haitao Ma, Xiang Zhiming, Ziniu Yu

published 10 Apr 2020

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Identification of genomic insertion and flanking sequences of the transgenic drought-tolerant maize line “SbSNAC1-382” using the single-molecule real-time (SMRT) sequencing method

Tingru Zeng, Dengfeng Zhang, Yongxiang Li, Chunhui Li, Xuyang Liu, Yunsu Shi, Yanchun Song, Yu Li, Tianyu Wang

published 10 Apr 2020

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A Zipf-plot based normalization method for high-throughput RNA-seq data

Bin Wang

published 09 Apr 2020

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Comparative analysis of sugarcane root transcriptome in response to the plant growth-promoting Burkholderia anthina MYSP113

Mukesh Kumar Malviya, Chang-Ning Li, Manoj Kumar Solanki, Rajesh Kumar Singh, Reemon Htun, Pratiksha Singh, Krishan K. Verma, Li-Tao Yang, Yang-Rui Li

published 08 Apr 2020

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