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Transcriptome analysis

Short k-mer abundance profiles yield robust machine learning features and accurate classifiers for RNA viruses

Md. Nafis Ul Alam, Umar Faruq Chowdhury

published 18 Sep 2020

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Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study

Borut Peterlin, Francesca Gualandi, Ales Maver, Serenella Servidei, Silvère M. van der Maarel, Francoise Lamy, Alexander Mejat, Teresinha Evangelista, Alessandra Ferlini

published 18 Sep 2020

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Dysregulation of club cell biology in idiopathic pulmonary fibrosis

Wu-Lin Zuo, Mahboubeh R. Rostami, Michelle LeBlanc, Robert J. Kaner, Sarah L. O’Beirne, Jason G. Mezey, Philip L. Leopold, Karsten Quast, Sudha Visvanathan, Jay S. Fine, Matthew J. Thomas, Ronald G. Crystal

published 17 Sep 2020

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Single-molecule real-time sequencing of the full-length transcriptome of loquat under low-temperature stress

Cuiping Pan, Yongqing Wang, Lian Tao, Hui Zhang, Qunxian Deng, Zhiwu Yang, Zhuoheng Chi, Yunmiao Yang

published 11 Sep 2020

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Proteomic and transcriptomic studies of BGC823 cells stimulated with Helicobacter pylori isolates from gastric MALT lymphoma

Qinghua Zou, Huifang Zhang, Fanliang Meng, Lihua He, Jianzhong Zhang, Di Xiao

published 11 Sep 2020

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Time-series transcriptomic analysis reveals novel gene modules that control theanine biosynthesis in tea plant (Camellia sinensis)

Haisheng Cao, Xiaolong He, Jinke Du, Rui Zhang, Ying Chen, Yong Ma, Qi Chen, Congbing Fang, Chi-Tang Ho, Shihua Zhang, Xiaochun Wan

published 10 Sep 2020

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Assessment of transcriptomic constraint-based methods for central carbon flux inference

Siddharth Bhadra-Lobo, Min Kyung Kim, Desmond S. Lun

published 09 Sep 2020

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Evaluation of molecular inversion probe versus TruSeq® custom methods for targeted next-generation sequencing

Rowida Almomani, Margherita Marchi, Maurice Sopacua, Patrick Lindsey, Erika Salvi, Bart de Koning, Silvia Santoro, Stefania Magri, Hubert J. M. Smeets, Filippo Martinelli Boneschi, Rayaz R. Malik, Dan Ziegler, Janneke G. J. Hoeijmakers, Gidon Bönhof, Sulayman Dib-Hajj, Stephen G. Waxman, Ingemar S. J. Merkies, Giuseppe Lauria, Catharina G. Faber, Monique M. Gerrits, on behalf on the PROPANE Study Group

published 02 Sep 2020

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Transcriptome analysis in rhesus macaques infected with hepatitis E virus genotype 1/3 infections and genotype 1 re-infection

Youkyung H. Choi, Xiugen Zhang, Ganesh Srinivasamoorthy, Michael A. Purdy

published 02 Sep 2020

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A genetic analysis of a Spanish population with early onset Parkinson’s disease

Tejera-Parrado Cristina, Mir Pablo, Periñán María Teresa, Vela-Desojo Lydia, Abreu-Rodríguez Irene, Alonso-Cánovas Araceli, Bernal-Bernal Inmaculada, Bonilla-Toribio Marta, Buiza-Rueda Dolores, Catalán-Alonso María José, García-Ramos Rocío, García-Ruiz Pedro José, Huertas-Fernández Ismael, Jesús Silvia, Miguel A-Espinosa Labrador, López-Manzanares Lydia, Martínez-Castrillo Juan Carlos, Ignacio J. Posada, Rojo-Sebastián Ana, Ruiz-Huete Cristina, Del Val Javier, Pilar Gómez-Garre

published 01 Sep 2020

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The clinical significance of stringent complete response in multiple myeloma is surpassed by minimal residual disease measurements

Maria-Teresa Cedena, Estela Martin-Clavero, Sandy Wong, Nina Shah, Natasha Bahri, Rafael Alonso, Carmen Barcenas, Antonio Valeri, Johny Salazar Tabares, Jose Sanchez-Pina, Clara Cuellar, Thomas Martin, Jeffrey Wolf, Juan-Jose Lahuerta, Joaquin Martinez-Lopez

published 31 Aug 2020

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Gene co-expression network analysis to identify critical modules and candidate genes of drought-resistance in wheat

Liangjie Lv, Wenying Zhang, Lijing Sun, Aiju Zhao, Yingjun Zhang, Limei Wang, Yuping Liu, Ziqian Li, Hui Li, Xiyong Chen

published 31 Aug 2020

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Infectivity and genes differentially expressed between young and aging theront cells of the marine fish parasite Cryptocaryon irritans

Hongshu Chi, Michael Goldstein, Angel Pichardo, Zung-Hang Wei, Wei-Jen Chang, Hui Gong

published 28 Aug 2020

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