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Transcriptome analysis

Integrated DNA methylome and transcriptome analysis reveals the epigenetic regulatory mechanisms underlying maize response to copper stress

Lin Zhao, Mengyan Zhang, [ ... ], Zhenyu Yun

Whole-Genome sequencing of Chikungunya Virus (CHIKV) from Pakistan: Detection of the East/Central/South African (ECSA) genotype during the 2024 outbreak in Mansehra

Massab Umair, Muhammad Yasir, [ ... ], Yusra Javed

Diagnostic accuracy of circulating tumor DNA for detection of ALK rearrangement in lung cancer: A systematic review and meta-analysis of 14 studies

Jiantong Sun, Lan Yang, [ ... ], Lei Li

Transcriptome sequencing reveals the evolutionary histories and gene expression evolution in two related Pagurus species

Zakea Sultana, Isaac Adeyemi Babarinde, [ ... ], Tomoyuki Nakano

SpaVGN: A hybrid deep learning framework for high-resolution spatial transcriptomics data reconstruction and spatial domain identification

Haiyan Wang, Yanping Zhang, [ ... ], Chunguang Zhao

Transcriptome profiling and weighted gene co-expression network analysis reveal changes of hub genes and molecular pathways in rat lungs following deep hypothermic circulatory arrest

Lei Wang, Qingtong Wu, [ ... ], Liangwan Chen

Mechanism of Astragaloside-Brucea javanica oil nanoemulsion against oral squamous cell carcinoma through CDK1/MTFR2: Network pharmacology, bioinformatics, and experimental studies

Yihan Lai, Runqiang Liu, [ ... ], Yisen Shao

Antimicrobial activity of Origanum vulgare L. essential oil and its effects on fungal gene expression

Yan Li, Lu He, [ ... ], Rongjun Li

Analysis of metabolomics and transcriptomics data to assess interactions in microalgal co-culture of Skeletonema marinoi and Prymnesium parvum

Mahnoor Zulfiqar, Anne-Susann Abel, [ ... ], Maria Sorokina

An autoencoder learning method for predicting breast cancer subtypes

Zahra Rostami, Kavitha Mukund, Maryam Masnadi-Shirazi, Shankar Subramaniam

Quiescence modulates age-related changes in the functional capacity of highly proliferative canine lung mesenchymal stromal cell populations

Nakesha Agyapong, Leslie Dominguez-Ortega, [ ... ], Julia Paxson

Skin transcriptomics of invasive Coqui frogs: stress responses, parasite signatures, and antimicrobial peptides

Randy Ortiz, Leeann C. Dabydeen, [ ... ], Juan C. Santos

Transcriptomic and metabolomic profiling of the potato plant response to zebra chip disease

Margaret A. Carpenter, Tonya J. Frew, [ ... ], Gail M. Timmerman-Vaughan

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