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Transcriptome analysis

Identification of pharmacogenetic variants from large scale next generation sequencing data in the Saudi population

Ewa Goljan, Mohammed Abouelhoda, Mohamed M. ElKalioby, Amjad Jabaan, Nada Alghithi, Brian F. Meyer, Dorota Monies

published 28 Jan 2022

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Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis

Thomas G. Nührenberg, Jasmin Stöckle, Federico Marini, Mark Zurek, Björn A. Grüning, Vladimir Benes, Lutz Hein, Franz-Josef Neumann, Christian Stratz, Marco Cederqvist, Willibald Hochholzer

published 27 Jan 2022

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Cryopreservation and post-thaw characterization of dissociated human islet cells

Leah A. Marquez-Curtis, Xiao-Qing Dai, Yan Hang, Jonathan Y. Lam, James Lyon, Jocelyn E. Manning Fox, Locksley E. McGann, Patrick E. MacDonald, Seung K. Kim, Janet A. W. Elliott

published 26 Jan 2022

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ASPICov: An automated pipeline for identification of SARS-Cov2 nucleotidic variants

Valentin Tilloy, Pierre Cuzin, Laura Leroi, Emilie Guérin, Patrick Durand, Sophie Alain

published 26 Jan 2022

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Expression of pyrethroid metabolizing P450 enzymes characterizes highly resistant Anopheles vector species targeted by successful deployment of PBO-treated bednets in Tanzania

Johnson Matowo, David Weetman, Patricia Pignatelli, Alexandra Wright, Jacques D. Charlwood, Robert Kaaya, Boniface Shirima, Oliva Moshi, Eliud Lukole, Jacklin Mosha, Alphaxard Manjurano, Franklin Mosha, Mark Rowland, Natacha Protopopoff

published 24 Jan 2022

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Results of a phase 1, randomized, placebo-controlled first-in-human trial of griffithsin formulated in a carrageenan vaginal gel

Natalia Teleshova, Marla J. Keller, José A. Fernández Romero, Barbara A. Friedland, George W. Creasy, Marlena G. Plagianos, Laurie Ray, Patrick Barnable, Larisa Kizima, Aixa Rodriguez, Nadjet Cornejal, Claudia Melo, Gearoff Cruz Rodriguez, Sampurna Mukhopadhyay, Giulia Calenda, Shweta U. Sinkar, Thierry Bonnaire, Asa Wesenberg, Shimin Zhang, Kyle Kleinbeck, Kenneth Palmer, Mohcine Alami, Barry R. O’Keefe, Patrick Gillevet, Hong Hur, Yupu Liang, Gabriela Santone, Raina N. Fichorova, Tamara Kalir, Thomas M. Zydowsky

published 20 Jan 2022

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Antennal transcriptome analysis of chemosensory genes in the cowpea beetle, Callosobruchus maculatus (F.)

Keisuke Tanaka, Kenji Shimomura, Akito Hosoi, Yui Sato, Yukari Oikawa, Yuma Seino, Takuto Kuribara, Shunsuke Yajima, Motohiro Tomizawa

published 19 Jan 2022

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Urine peptidome in combination with transcriptomics analysis highlights MMP7, MMP14 and PCSK5 for further investigation in chronic kidney disease

Eleni Petra, Justyna Siwy, Antonia Vlahou, Joachim Jankowski

published 19 Jan 2022

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Regeneration of duckweed (Lemna turonifera) involves genetic molecular regulation and cyclohexane release

Lin Yang, Jinge Sun, Congyu Yan, Junyi Wu, Yaya Wang, Qiuting Ren, Shen Wang, Xu Ma, Ling Zhao, Jinsheng Sun

published 06 Jan 2022

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Genome-wide identification of CCT genes in wheat (Triticum aestivum L.) and their expression analysis during vernalization

HongWei Zhang, Bo Jiao, FuShuang Dong, XinXia Liang, Shuo Zhou, HaiBo Wang

published 05 Jan 2022

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Developmental gene regulatory network connections predicted by machine learning from gene expression data alone

Jingyi Zhang, Farhan Ibrahim, Emily Najmulski, George Katholos, Doaa Altarawy, Lenwood S. Heath, Sarah L. Tulin

published 28 Dec 2021

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Hepatic transcriptome analysis identifies genes, polymorphisms and pathways involved in the fatty acids metabolism in sheep

Asep Gunawan, Kasita Listyarini, Ratna Sholatia Harahap, Jakaria, Katrin Roosita, Cece Sumantri, Ismeth Inounu, Syeda Hasina Akter, Md. Aminul Islam, Muhammad Jasim Uddin

published 23 Dec 2021

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NGS read classification using AI

Benjamin Voigt, Oliver Fischer, Christian Krumnow, Christian Herta, Piotr Wojciech Dabrowski

published 22 Dec 2021

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