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Transcriptome analysis

Lactiplantibacillus plantarum GUANKE alleviates Zearalenone-induced intestinal dysfunction by modulating oxidative stress and inflammation

Qiaoning Chang, Yanchao Zhao, Han Li, Bin Zhang, Meidi Zhang, Pei Zhao, Jingmin He, Bugao Li, Ming D. Li

published 01 Jul 2026

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An integrative multi-omics approach points to membrane composition as a key factor in E. coli persistence

Silvia J. Cañas-Duarte, Lei Sun, María Isabel Pérez-López, Cornelia Herrfurth, Lina M. Contreras, Ivo Feussner, Chad Leidy, Johan Paulsson, Diego M. Riaño-Pachón, Juan M. Pedraza, Silvia Restrepo

published 29 Jun 2026

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Potentials and challenges of next generation sequencing-guided individualized treatment for management of rifampicin-resistant tuberculosis – A qualitative study

Tu Pham Hien Trang, Antonio Barrenechea-Pulache, Katinka De Wet, Boitumelo Fanampe, Salome Charalambous, Annelies Van Rie

published 26 Jun 2026

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A comparison between bacterial cultivation and 16S rRNA next generation sequencing approaches for analysis of bacteria in urine and cerebrospinal fluid samples

Rasmi Abu-Helu, Amal Abuhilal, Yasmin Attili, Murad Ibrahim, Ghaleb Adwan, Ibrahim Abbasi

published 25 Jun 2026

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Extremes on the benign-malignant tumour spectrum: Distinct transcriptomic landscapes between two common canine perianal neoplasms based on the hallmarks of cancer

Alexander F. H. Haake, Alina K. Loriani Fard, Vladimir M. Jovanovic, Michael Hummel, Sandro Andreotti, Achim D. Gruber

published 22 Jun 2026

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Bioinformatic identification of CD8+ T cell activation mediated by key genes in fecal microbiota transplantation for irritable bowel syndrome

Ying Fei, Ming-Yi Gao, Nan Qiao, Jia Hu, Ling He, Jiao-Li Zhou, Ning-Ning Zheng, Ting-Ting Liu

published 16 Jun 2026

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Identification and diagnostic potential of pyroptosis-related genes in endometriosis: A novel bioinformatics analysis and validation

Li Wang, Piaopiao Teng, Jiawen Chen, Caiyun Ding, Xianchen Luo, Chang Su, Guantai Ni, Yuanyuan Lyu, Jin Ding

published 09 Jun 2026

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Differential analysis of Short chain fatty acids incubation in autistic organoids based on transcriptome sequencing

Zaixin Wu, Xinyi Liu, Xiaobo Han, Miao Li

published 05 Jun 2026

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Immunomodulatory effects of a multi-component pharmacological intervention on diabetic peripheral neuropathy in type 2 diabetic rats: An exploratory study

Lu Zhang, Si Wang, Jie Lei, Lingrui Zeng, Ailin Lu, Yongqing Wu, Yuan Shi, Jing Yang, Mengrui Yuan, Hongyi Liu

published 04 Jun 2026

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Analysis of leaf morphology development-related genes and photosynthetic metabolic pathways in the transcriptomes of new leaves of Tea-Oil tree (Camellia oleifera ‘changlin53’)

Zongshun Zhou, Chuansong Chen, Ying Jiang, Yikai Hua, Yisi Liu, Hang Wang, Lixian Cao, Shuhua Wu, Hongyan Guo

published 04 Jun 2026

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Transcriptomic profile of the hippocampus of rat strains with contrasting nervous system excitability

Marina Pavlova, Irina Shalaginova, Natalia Dyuzhikova

published 03 Jun 2026

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Staphylococcus aureus agr-type vs genetic background: molecular signatures determining differential metabolism and virulence potential

Mariane Pivard, Julian Bär, Tomas Demeter, Srikanth Mairpady Shambat, Annelies S. Zinkernagel

published 03 Jun 2026

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Integration of single-cell and bulk RNA sequencing reveals programmed cell death-associated transcriptional programs in sepsis-induced acute lung injury

Xin Li, Weihong Liu, Yucui Zhang, Guohan Xiang, Qianyu Bi, Xin Lin, Yang Liu, Tejin Ba, Li Kong, Yang Liu, Hao Hao

published 03 Jun 2026

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