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Transcriptome analysis

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

published 22 Dec 2009

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Next-Generation Phage Display: Integrating and Comparing Available Molecular Tools to Enable Cost-Effective High-Throughput Analysis

Emmanuel Dias-Neto, Diana N. Nunes, Ricardo J. Giordano, Jessica Sun, Gregory H. Botz, Kuan Yang, João C. Setubal, Renata Pasqualini, Wadih Arap

published 17 Dec 2009

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Cytoplasmic Acidification and the Benzoate Transcriptome in Bacillus subtilis

Ryan D. Kitko, Rebecca L. Cleeton, Erin I. Armentrout, Grace E. Lee, Ken Noguchi, Melanie B. Berkmen, Brian D. Jones, Joan L. Slonczewski

published 14 Dec 2009

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Exome Sequencing of a Multigenerational Human Pedigree

Dale Hedges, Dan Burges, Eric Powell, Cherylyn Almonte, Jia Huang, Stuart Young, Benjamin Boese, Mike Schmidt, Margaret A. Pericak-Vance, Eden Martin, Xinmin Zhang, Timothy T. Harkins, Stephan Züchner

published 14 Dec 2009

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Integrative Discovery of Epigenetically Derepressed Cancer Testis Antigens in NSCLC

Chad A. Glazer, Ian M. Smith, Michael F. Ochs, Shahnaz Begum, William Westra, Steven S. Chang, Wenyue Sun, Sheetal Bhan, Zubair Khan, Steven Ahrendt, Joseph A. Califano

published 04 Dec 2009

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Gender Differences in a Drosophila Transcriptomic Model of Chronic Pentylenetetrazole Induced Behavioral Deficit

Abhay Sharma, Farhan Mohammad, Priyanka Singh

published 02 Dec 2009

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Comparative Analysis of the Global Transcriptome of Anopheles funestus from Mali, West Africa

Andrew C. Serazin, Ali N. Dana, Maureen E. Hillenmeyer, Neil F. Lobo, Mamadou B. Coulibaly, Michael B. Willard, Brent W. Harker, Igor V. Sharakhov, Frank H. Collins, Jose M. C. Ribeiro, Nora J. Besansky

published 19 Nov 2009

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Transcriptome Profiling of Human Pre-Implantation Development

Pu Zhang, Marco Zucchelli, Sara Bruce, Fredwell Hambiliki, Anneli Stavreus-Evers, Lev Levkov, Heli Skottman, Erja Kerkelä, Juha Kere, Outi Hovatta

published 16 Nov 2009

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Glioblastoma Subclasses Can Be Defined by Activity among Signal Transduction Pathways and Associated Genomic Alterations

Cameron Brennan, Hiroyuki Momota, Dolores Hambardzumyan, Tatsuya Ozawa, Adesh Tandon, Alicia Pedraza, Eric Holland

published 13 Nov 2009

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Tissue Compartment Analysis for Biomarker Discovery by Gene Expression Profiling

Antoine Disset, Lydie Cheval, Olga Soutourina, Jean-Paul Duong Van Huyen, Guorong Li, Christian Genin, Jacques Tostain, Alexandre Loupy, Alain Doucet, Rabary Rajerison

published 10 Nov 2009

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Relationships between Hematopoiesis and Hepatogenesis in the Midtrimester Fetal Liver Characterized by Dynamic Transcriptomic and Proteomic Profiles

Yuanbiao Guo, Xuequn Zhang, Jian Huang, Yan Zeng, Wei Liu, Chao Geng, Ka Wan Li, Dong Yang, Songfeng Wu, Handong Wei, Zeguang Han, Xiaohong Qian, Ying Jiang, Fuchu He

published 28 Oct 2009

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Converting Redox Signaling to Apoptotic Activities by Stress-Responsive Regulators HSF1 and NRF2 in Fenretinide Treated Cancer Cells

Kankan Wang, Hai Fang, Dakai Xiao, Xuehua Zhu, Miaomiao He, Xiaoling Pan, Jiantao Shi, Hui Zhang, Xiaohong Jia, Yanzhi Du, Ji Zhang

published 21 Oct 2009

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Crosstalks between Myo-Inositol Metabolism, Programmed Cell Death and Basal Immunity in Arabidopsis

Ping Hong Meng, Cécile Raynaud, Guillaume Tcherkez, Sophie Blanchet, Kamal Massoud, Séverine Domenichini, Yves Henry, Ludivine Soubigou-Taconnat, Caroline Lelarge-Trouverie, Patrick Saindrenan, Jean Pierre Renou, Catherine Bergounioux

published 08 Oct 2009

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