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Transcriptome analysis

Global Changes in Staphylococcus aureus Gene Expression in Human Blood

Natalia Malachowa, Adeline R. Whitney, Scott D. Kobayashi, Daniel E. Sturdevant, Adam D. Kennedy, Kevin R. Braughton, Duncan W. Shabb, Binh An Diep, Henry F. Chambers, Michael Otto, Frank R. DeLeo

published 15 Apr 2011

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Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, Xin Zhou, Gregory A. C. Singer, Donald J. Baird

published 13 Apr 2011

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Identification of a Gene Regulatory Network Necessary for the Initiation of Oligodendrocyte Differentiation

Victoria A. Swiss, Tung Nguyen, Jason Dugas, Adiljan Ibrahim, Ben Barres, Ioannis P. Androulakis, Patrizia Casaccia

published 07 Apr 2011

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Transcriptome Analysis of Female and Male Xiphophorus maculatus Jp 163 A

Ziping Zhang, Yilei Wang, Shuhong Wang, Jingtao Liu, Wesley Warren, Makedonka Mitreva, Ronald B. Walter

published 05 Apr 2011

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Assessing Matched Normal and Tumor Pairs in Next-Generation Sequencing Studies

Liang Goh, Geng Bo Chen, Ioana Cutcutache, Benjamin Low, Bin Tean Teh, Steve Rozen, Patrick Tan

published 18 Mar 2011

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A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, Yang Yang, Yifei Tang, Jing Shang, Bairong Shen

published 14 Mar 2011

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Decoding a Substantial Set of Samples in Parallel by Massive Sequencing

Mårten Neiman, Sverker Lundin, Peter Savolainen, Afshin Ahmadian

published 09 Mar 2011

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A Comparison of Single Molecule and Amplification Based Sequencing of Cancer Transcriptomes

Lee T. Sam, Doron Lipson, Tal Raz, Xuhong Cao, John Thompson, Patrice M. Milos, Dan Robinson, Arul M. Chinnaiyan, Chandan Kumar-Sinha, Christopher A. Maher

published 01 Mar 2011

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A De Novo Expression Profiling of Anopheles funestus, Malaria Vector in Africa, Using 454 Pyrosequencing

Richard Gregory, Alistair C. Darby, Helen Irving, Mamadou B. Coulibaly, Margaret Hughes, Lizette L. Koekemoer, Maureen Coetzee, Hilary Ranson, Janet Hemingway, Neil Hall, Charles S. Wondji

published 25 Feb 2011

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Diurnal Rhythms Result in Significant Changes in the Cellular Protein Complement in the Cyanobacterium Cyanothece 51142

Jana Stöckel, Jon M. Jacobs, Thanura R. Elvitigala, Michelle Liberton, Eric A. Welsh, Ashoka D. Polpitiya, Marina A. Gritsenko, Carrie D. Nicora, David W. Koppenaal, Richard D. Smith, Himadri B. Pakrasi

published 22 Feb 2011

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Differential Expression of Non-Coding RNAs and Continuous Evolution of the X Chromosome in Testicular Transcriptome of Two Mouse Species

David Homolka, Robert Ivanek, Jiri Forejt, Petr Jansa

published 14 Feb 2011

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Comparative Functional Genomics of Salt Stress in Related Model and Cultivated Plants Identifies and Overcomes Limitations to Translational Genomics

Diego H. Sanchez, Fernando L. Pieckenstain, Jedrzey Szymanski, Alexander Erban, Mariusz Bromke, Matthew A. Hannah, Ute Kraemer, Joachim Kopka, Michael K. Udvardi

published 14 Feb 2011

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Systematic Evaluation of Three microRNA Profiling Platforms: Microarray, Beads Array, and Quantitative Real-Time PCR Array

Bin Wang, Paul Howel, Skjalg Bruheim, Jingfang Ju, Laurie B. Owen, Oystein Fodstad, Yaguang Xi

published 11 Feb 2011

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