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Transcriptome analysis

ReadSeeker: A DNABERT based de-novo read-level gene predictor

Ben Wulf, Piotr Wojciech Dabrowski

IGM: Integrated Gene-expression Modeling for multi-condition flux-preserving genome-scale metabolic models

Thummarat Paklao, Apichat Suratanee, Kitiporn Plaimas

A gene-specific RNA enrichment protocol for nanopore direct-RNA sequencing

Maja Bele Dyrendalsli, Cecilie Løkke, Christer Einvik

Persistent foot-and-mouth disease virus infection of the bovine nasopharynx is associated with suppression of innate and cellular immunity

Benedikt Litz, Florian Pfaff, [ ... ], Michael Eschbaumer

Multi-modal data to identify key factors influencing lung injury in ARDS patients undergoing invasive mechanical ventilation: A prospective multi-center observational study protocol

Zhimei Duan, Di Lian, [ ... ], Zhihai Han

High-dimensional phenotyping reveals novel macrophage-like and hybrid subsets within murine splenic conventional dendritic cells

Chunqing Yang, Qingjie Xue, [ ... ], Qinqin Wang

Comprehensive transcriptome and metabolome analysis to exploration the effects of TCs on GCs lipid metabolism at goose pre-ovulatory follicle

Jisi Ma, Wenqiang Sun, [ ... ], Xiang Gan

The shared biomarkers and molecular mechanisms of systemic lupus erythematosus and type 2 diabetes

Dawei Yang, Youqi Zhang, [ ... ], Fan Yang

ITIH2 in colorectal cancer metastasis: Weighted Gene Co-expression Network Analysis-guided functional validation

Xin-Feng Zhang, Xiao-Li Zhang, [ ... ], Huayou Luo

Doing more with less: Genomic quasi-G-primes differentiate septic from healthy patients

Congzhou M. Sha, Michail Patsakis, [ ... ], Ilias Georgakopoulos-Soares

Evidence of an allostatic response by intestinal tissues following induction of joint inflammation

Meghan M. Moran, Jun Li, [ ... ], Anna Plaas

Computational assessment of the relationship between metabolism and histone methylation in cancer cells

Mohammad Rasouli Koohi, Mahya Mehrmohamadi

Cell death-related gene signatures as dual-function biomarkers: Early diagnosis and therapeutic targeting in Staphylococcus aureus pneumonia

Cao Qing, Wanjuan Sun, [ ... ], Lu Lin

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