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Transcriptome analysis

Exploring Metabolic Pathway Reconstruction and Genome-Wide Expression Profiling in Lactobacillus reuteri to Define Functional Probiotic Features

Delphine M. Saulnier, Filipe Santos, Stefan Roos, Toni-Ann Mistretta, Jennifer K. Spinler, Douwe Molenaar, Bas Teusink, James Versalovic

published 29 Apr 2011

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Functional Genomics Unique to Week 20 Post Wounding in the Deep Cone/Fat Dome of the Duroc/Yorkshire Porcine Model of Fibroproliferative Scarring

Loren H. Engrav, Christopher K. Tuggle, Kathleen F. Kerr, Kathy Q. Zhu, Surawej Numhom, Oliver P. Couture, Richard P. Beyer, Anne M. Hocking, Gretchen J. Carrougher, Maria Luiza C. Ramos, Matthew B. Klein, Nicole S. Gibran

published 20 Apr 2011

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Massive-Scale RNA-Seq Analysis of Non Ribosomal Transcriptome in Human Trisomy 21

Valerio Costa, Claudia Angelini, Luciana D'Apice, Margherita Mutarelli, Amelia Casamassimi, Linda Sommese, Maria Assunta Gallo, Marianna Aprile, Roberta Esposito, Luigi Leone, Aldo Donizetti, Stefania Crispi, Monica Rienzo, Berardo Sarubbi, Raffaele Calabrò, Marco Picardi, Paola Salvatore, Teresa Infante, Piergiuseppe De Berardinis, Claudio Napoli, Alfredo Ciccodicola

published 20 Apr 2011

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Global Changes in Staphylococcus aureus Gene Expression in Human Blood

Natalia Malachowa, Adeline R. Whitney, Scott D. Kobayashi, Daniel E. Sturdevant, Adam D. Kennedy, Kevin R. Braughton, Duncan W. Shabb, Binh An Diep, Henry F. Chambers, Michael Otto, Frank R. DeLeo

published 15 Apr 2011

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Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, Xin Zhou, Gregory A. C. Singer, Donald J. Baird

published 13 Apr 2011

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Identification of a Gene Regulatory Network Necessary for the Initiation of Oligodendrocyte Differentiation

Victoria A. Swiss, Tung Nguyen, Jason Dugas, Adiljan Ibrahim, Ben Barres, Ioannis P. Androulakis, Patrizia Casaccia

published 07 Apr 2011

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Transcriptome Analysis of Female and Male Xiphophorus maculatus Jp 163 A

Ziping Zhang, Yilei Wang, Shuhong Wang, Jingtao Liu, Wesley Warren, Makedonka Mitreva, Ronald B. Walter

published 05 Apr 2011

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Assessing Matched Normal and Tumor Pairs in Next-Generation Sequencing Studies

Liang Goh, Geng Bo Chen, Ioana Cutcutache, Benjamin Low, Bin Tean Teh, Steve Rozen, Patrick Tan

published 18 Mar 2011

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A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, Yang Yang, Yifei Tang, Jing Shang, Bairong Shen

published 14 Mar 2011

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Decoding a Substantial Set of Samples in Parallel by Massive Sequencing

Mårten Neiman, Sverker Lundin, Peter Savolainen, Afshin Ahmadian

published 09 Mar 2011

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A Comparison of Single Molecule and Amplification Based Sequencing of Cancer Transcriptomes

Lee T. Sam, Doron Lipson, Tal Raz, Xuhong Cao, John Thompson, Patrice M. Milos, Dan Robinson, Arul M. Chinnaiyan, Chandan Kumar-Sinha, Christopher A. Maher

published 01 Mar 2011

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A De Novo Expression Profiling of Anopheles funestus, Malaria Vector in Africa, Using 454 Pyrosequencing

Richard Gregory, Alistair C. Darby, Helen Irving, Mamadou B. Coulibaly, Margaret Hughes, Lizette L. Koekemoer, Maureen Coetzee, Hilary Ranson, Janet Hemingway, Neil Hall, Charles S. Wondji

published 25 Feb 2011

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Diurnal Rhythms Result in Significant Changes in the Cellular Protein Complement in the Cyanobacterium Cyanothece 51142

Jana Stöckel, Jon M. Jacobs, Thanura R. Elvitigala, Michelle Liberton, Eric A. Welsh, Ashoka D. Polpitiya, Marina A. Gritsenko, Carrie D. Nicora, David W. Koppenaal, Richard D. Smith, Himadri B. Pakrasi

published 22 Feb 2011

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