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Transcriptome analysis

Unraveling Molecular Signatures of Immunostimulatory Adjuvants in the Female Genital Tract through Systems Biology

Madelene Lindqvist, Intawat Nookaew, Ingrid Brinkenberg, Emma Samuelson, Karolina Thörn, Jens Nielsen, Ali M. Harandi

published 07 Jun 2011

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Regional Regulation of Transcription in the Bovine Genome

Arun Kommadath, Haisheng Nie, Martien A. M. Groenen, Marinus F. W. te Pas, Roel F. Veerkamp, Mari A. Smits

published 03 Jun 2011

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Dual Organism Transcriptomics of Airway Epithelial Cells Interacting with Conidia of Aspergillus fumigatus

Jean L. Oosthuizen, Pol Gomez, Jian Ruan, Tillie L. Hackett, Margo M. Moore, Darryl A. Knight, Scott J. Tebbutt

published 31 May 2011

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Evaluating the Fidelity of De Novo Short Read Metagenomic Assembly Using Simulated Data

Miguel Pignatelli, Andrés Moya

published 23 May 2011

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Discovery of Nuclear-Encoded Genes for the Neurotoxin Saxitoxin in Dinoflagellates

Anke Stüken, Russell J. S. Orr, Ralf Kellmann, Shauna A. Murray, Brett A. Neilan, Kjetill S. Jakobsen

published 18 May 2011

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Comparative Transcriptome Analysis of Bacillus subtilis Responding to Dissolved Oxygen in Adenosine Fermentation

Wen-Bang Yu, Shu-Hong Gao, Chun-Yun Yin, Ying Zhou, Bang-Ce Ye

published 18 May 2011

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Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms

Shingo Suzuki, Naoaki Ono, Chikara Furusawa, Bei-Wen Ying, Tetsuya Yomo

published 17 May 2011

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The Sensitivity of Massively Parallel Sequencing for Detecting Candidate Infectious Agents Associated with Human Tissue

Richard A. Moore, René L. Warren, J. Douglas Freeman, Julia A. Gustavsen, Caroline Chénard, Jan M. Friedman, Curtis A. Suttle, Yongjun Zhao, Robert A. Holt

published 13 May 2011

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Selection and Validation of Reference Genes for Quantitative Real-Time PCR in Buckwheat (Fagopyrum esculentum) Based on Transcriptome Sequence Data

Natalia V. Demidenko, Maria D. Logacheva, Aleksey A. Penin

published 12 May 2011

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Targeted Assembly of Short Sequence Reads

René L. Warren, Robert A. Holt

published 11 May 2011

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Protocol Dependence of Sequencing-Based Gene Expression Measurements

Tal Raz, Philipp Kapranov, Doron Lipson, Stan Letovsky, Patrice M. Milos, John F. Thompson

published 06 May 2011

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Sequencing-Based Approaches Reveal Low Ambient Temperature-Responsive and Tissue-Specific MicroRNAs in Phalaenopsis Orchid

Feng-Ming An, Shuan-Rung Hsiao, Ming-Tsair Chan

published 06 May 2011

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The Human Airway Epithelial Basal Cell Transcriptome

Neil R. Hackett, Renat Shaykhiev, Matthew S. Walters, Rui Wang, Rachel K. Zwick, Barbara Ferris, Bradley Witover, Jacqueline Salit, Ronald G. Crystal

published 04 May 2011

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