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Transcriptome analysis

A Model-Based Clustering Method for Genomic Structural Variant Prediction and Genotyping Using Paired-End Sequencing Data

Matthew Hayes, Yoon Soo Pyon, Jing Li

SNP Design from 454 Sequencing of Podosphaera plantaginis Transcriptome Reveals a Genetically Diverse Pathogen Metapopulation with High Levels of Mixed-Genotype Infection

Charlotte Tollenaere, Hanna Susi, [ ... ], Anna-Liisa Laine

Comparative Analysis of Kabuli Chickpea Transcriptome with Desi and Wild Chickpea Provides a Rich Resource for Development of Functional Markers

Gaurav Agarwal, Shalu Jhanwar, [ ... ], Mukesh Jain

Development of Transcriptomic Resources for Interrogating the Biosynthesis of Monoterpene Indole Alkaloids in Medicinal Plant Species

Elsa Góngora-Castillo, Kevin L. Childs, [ ... ], C. Robin Buell

Anti-Inflammatory Lactobacillus rhamnosus CNCM I-3690 Strain Protects against Oxidative Stress and Increases Lifespan in Caenorhabditis elegans

Gianfranco Grompone, Patricia Martorell, [ ... ], Daniel Ramón

A Comprehensive Evaluation of Alignment Algorithms in the Context of RNA-Seq

Robert Lindner, Caroline C. Friedel

SNP Detection from De Novo Transcriptome Sequencing in the Bivalve Macoma balthica: Marker Development for Evolutionary Studies

Eric Pante, Audrey Rohfritsch, [ ... ], Pascale Garcia

Ocean Acidification Affects Redox-Balance and Ion-Homeostasis in the Life-Cycle Stages of Emiliania huxleyi

Sebastian D. Rokitta, Uwe John, Björn Rost

A Genome-Wide Investigation of Expression Characteristics of Natural Antisense Transcripts in Liver and Muscle Samples of Pigs

Congying Chen, Rongxing Wei, [ ... ], Lusheng Huang

FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads

Haibin Xu, Xiang Luo, [ ... ], Shilin Chen

Prospective Transcriptomic Pathway Analysis of Human Lymphatic Vascular Insufficiency: Identification and Validation of a Circulating Biomarker Panel

Shin Lin, Jeanna Kim, [ ... ], Stanley G. Rockson

Genome-Wide Transcriptome and Proteome Analysis on Different Developmental Stages of Cordyceps militaris

Yalin Yin, Guojun Yu, [ ... ], Hui Sun

Identification of a Transcription Factor Controlling pH-Dependent Organic Acid Response in Aspergillus niger

Lars Poulsen, Mikael Rørdam Andersen, Anna Eliasson Lantz, Jette Thykaer

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