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Transcriptome analysis

Systems Analysis of Lactose Metabolism in Trichoderma reesei Identifies a Lactose Permease That Is Essential for Cellulase Induction

Christa Ivanova, Jenny A. Bååth, Bernhard Seiboth, Christian P. Kubicek

published 08 May 2013

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Transcriptome Sequencing of Zhikong Scallop (Chlamys farreri) and Comparative Transcriptomic Analysis with Yesso Scallop (Patinopecten yessoensis)

Shan Wang, Rui Hou, Zhenmin Bao, Huixia Du, Yan He, Hailin Su, Yueyue Zhang, Xiaoteng Fu, Wenqian Jiao, Yan Li, Lingling Zhang, Shi Wang, Xiaoli Hu

published 07 May 2013

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Fine De Novo Sequencing of a Fungal Genome Using only SOLiD Short Read Data: Verification on Aspergillus oryzae RIB40

Myco Umemura, Yoshinori Koyama, Itaru Takeda, Hiroko Hagiwara, Tsutomu Ikegami, Hideaki Koike, Masayuki Machida

published 07 May 2013

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Next-Generation Sequencing Identifies Transportin 3 as the Causative Gene for LGMD1F

Annalaura Torella, Marina Fanin, Margherita Mutarelli, Enrico Peterle, Francesca Del Vecchio Blanco, Rossella Rispoli, Marco Savarese, Arcomaria Garofalo, Giulio Piluso, Lucia Morandi, Giulia Ricci, Gabriele Siciliano, Corrado Angelini, Vincenzo Nigro

published 07 May 2013

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The Impact of Paralogy on Phylogenomic Studies – A Case Study on Annelid Relationships

Torsten H. Struck

published 07 May 2013

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Transcriptome Sequencing and De Novo Analysis of the Copepod Calanus sinicus Using 454 GS FLX

Juan Ning, Minxiao Wang, Chaolun Li, Song Sun

published 06 May 2013

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Developmental Gene Discovery in a Hemimetabolous Insect: De Novo Assembly and Annotation of a Transcriptome for the Cricket Gryllus bimaculatus

Victor Zeng, Ben Ewen-Campen, Hadley W. Horch, Siegfried Roth, Taro Mito, Cassandra G. Extavour

published 06 May 2013

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Characterization of Gonadal Transcriptomes from Nile Tilapia (Oreochromis niloticus) Reveals Differentially Expressed Genes

Wenjing Tao, Jing Yuan, Linyan Zhou, Lina Sun, Yunlv Sun, Shijie Yang, Minghui Li, Sheng Zeng, Baofeng Huang, Deshou Wang

published 03 May 2013

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Transcriptome of the Lymantria dispar (Gypsy Moth) Larval Midgut in Response to Infection by Bacillus thuringiensis

Michael E. Sparks, Michael B. Blackburn, Daniel Kuhar, Dawn E. Gundersen-Rindal

published 01 May 2013

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CNVrd, a Read-Depth Algorithm for Assigning Copy-Number at the FCGR Locus: Population-Specific Tagging of Copy Number Variation at FCGR3B

Hoang tan Nguyen, Tony R. Merriman, Michael A. Black

published 30 Apr 2013

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Textrous!: Extracting Semantic Textual Meaning from Gene Sets

Hongyu Chen, Bronwen Martin, Caitlin M. Daimon, Sana Siddiqui, Louis M. Luttrell, Stuart Maudsley

published 30 Apr 2013

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Simultaneous Transcriptome Analysis of Sorghum and Bipolaris sorghicola by Using RNA-seq in Combination with De Novo Transcriptome Assembly

Takayuki Yazawa, Hiroyuki Kawahigashi, Takashi Matsumoto, Hiroshi Mizuno

published 30 Apr 2013

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Effects of GC Bias in Next-Generation-Sequencing Data on De Novo Genome Assembly

Yen-Chun Chen, Tsunglin Liu, Chun-Hui Yu, Tzen-Yuh Chiang, Chi-Chuan Hwang

published 29 Apr 2013

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