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Transcriptome analysis

Systems Analysis of Lactose Metabolism in Trichoderma reesei Identifies a Lactose Permease That Is Essential for Cellulase Induction

Christa Ivanova, Jenny A. Bååth, Bernhard Seiboth, Christian P. Kubicek

Transcriptome Sequencing of Zhikong Scallop (Chlamys farreri) and Comparative Transcriptomic Analysis with Yesso Scallop (Patinopecten yessoensis)

Shan Wang, Rui Hou, [ ... ], Xiaoli Hu

Fine De Novo Sequencing of a Fungal Genome Using only SOLiD Short Read Data: Verification on Aspergillus oryzae RIB40

Myco Umemura, Yoshinori Koyama, [ ... ], Masayuki Machida

Next-Generation Sequencing Identifies Transportin 3 as the Causative Gene for LGMD1F

Annalaura Torella, Marina Fanin, [ ... ], Vincenzo Nigro

The Impact of Paralogy on Phylogenomic Studies – A Case Study on Annelid Relationships

Torsten H. Struck

Transcriptome Sequencing and De Novo Analysis of the Copepod Calanus sinicus Using 454 GS FLX

Juan Ning, Minxiao Wang, Chaolun Li, Song Sun

Developmental Gene Discovery in a Hemimetabolous Insect: De Novo Assembly and Annotation of a Transcriptome for the Cricket Gryllus bimaculatus

Victor Zeng, Ben Ewen-Campen, [ ... ], Cassandra G. Extavour

Characterization of Gonadal Transcriptomes from Nile Tilapia (Oreochromis niloticus) Reveals Differentially Expressed Genes

Wenjing Tao, Jing Yuan, [ ... ], Deshou Wang

Transcriptome of the Lymantria dispar (Gypsy Moth) Larval Midgut in Response to Infection by Bacillus thuringiensis

Michael E. Sparks, Michael B. Blackburn, Daniel Kuhar, Dawn E. Gundersen-Rindal

CNVrd, a Read-Depth Algorithm for Assigning Copy-Number at the FCGR Locus: Population-Specific Tagging of Copy Number Variation at FCGR3B

Hoang tan Nguyen, Tony R. Merriman, Michael A. Black

Textrous!: Extracting Semantic Textual Meaning from Gene Sets

Hongyu Chen, Bronwen Martin, [ ... ], Stuart Maudsley

Simultaneous Transcriptome Analysis of Sorghum and Bipolaris sorghicola by Using RNA-seq in Combination with De Novo Transcriptome Assembly

Takayuki Yazawa, Hiroyuki Kawahigashi, Takashi Matsumoto, Hiroshi Mizuno

Effects of GC Bias in Next-Generation-Sequencing Data on De Novo Genome Assembly

Yen-Chun Chen, Tsunglin Liu, [ ... ], Chi-Chuan Hwang

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