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Transcriptome analysis

The Transcriptomic Signature of RacA Activation and Inactivation Provides New Insights into the Morphogenetic Network of Aspergillus niger

Min Jin Kwon, Benjamin M. Nitsche, Mark Arentshorst, Thomas R. Jørgensen, Arthur F. J. Ram, Vera Meyer

published 24 Jul 2013

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Role of a GntR-Family Response Regulator LbrA in Listeria monocytogenes Biofilm Formation

Andrew Wassinger, Lu Zhang, Erin Tracy, Robert S. Munson Jr, Sophia Kathariou, Hua H. Wang

published 23 Jul 2013

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PCR-Induced Transitions Are the Major Source of Error in Cleaned Ultra-Deep Pyrosequencing Data

Johanna Brodin, Mattias Mild, Charlotte Hedskog, Ellen Sherwood, Thomas Leitner, Björn Andersson, Jan Albert

published 23 Jul 2013

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Global Transcriptional Responses of the Toxic Cyanobacterium, Microcystis aeruginosa, to Nitrogen Stress, Phosphorus Stress, and Growth on Organic Matter

Matthew J. Harke, Christopher J. Gobler

published 23 Jul 2013

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A New Omics Data Resource of Pleurocybella porrigens for Gene Discovery

Tomohiro Suzuki, Kaori Igarashi, Hideo Dohra, Takumi Someya, Tomoyuki Takano, Kiyonori Harada, Saori Omae, Hirofumi Hirai, Kentaro Yano, Hirokazu Kawagishi

published 23 Jul 2013

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Advantages of Single-Molecule Real-Time Sequencing in High-GC Content Genomes

Seung Chul Shin, Do Hwan Ahn, Su Jin Kim, Hyoungseok Lee, Tae-Jin Oh, Jong Eun Lee, Hyun Park

published 23 Jul 2013

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A Microfluidic DNA Library Preparation Platform for Next-Generation Sequencing

Hanyoup Kim, Mais J. Jebrail, Anupama Sinha, Zachary W. Bent, Owen D. Solberg, Kelly P. Williams, Stanley A. Langevin, Ronald F. Renzi, James L. Van De Vreugde, Robert J. Meagher, Joseph S. Schoeniger, Todd W. Lane, Steven S. Branda, Michael S. Bartsch, Kamlesh D. Patel

published 22 Jul 2013

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The Transcriptomic Basis of Oviposition Behaviour in the Parasitoid Wasp Nasonia vitripennis

Bart A. Pannebakker, Urmi Trivedi, Mark A. Blaxter, Rebekah Watt, David M. Shuker

published 19 Jul 2013

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Normalizing RNA-Sequencing Data by Modeling Hidden Covariates with Prior Knowledge

Sara Mostafavi, Alexis Battle, Xiaowei Zhu, Alexander E. Urban, Douglas Levinson, Stephen B. Montgomery, Daphne Koller

published 18 Jul 2013

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Genotyping by Genome Reducing and Sequencing for Outbred Animals

Qiang Chen, Yufang Ma, Yumei Yang, Zhenliang Chen, Rongrong Liao, Xiaoxian Xie, Zhen Wang, Pengfei He, Yingying Tu, Xiangzhe Zhang, Changsuo Yang, Hongjie Yang, Fuqing Yu, Youmin Zheng, Zhiwu Zhang, Qishan Wang, Yuchun Pan

published 18 Jul 2013

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TCW: Transcriptome Computational Workbench

Carol Soderlund, William Nelson, Mark Willer, David R. Gang

published 17 Jul 2013

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Extensive Modulation of the Transcription Factor Transcriptome during Somatic Embryogenesis in Arabidopsis thaliana

Marta Gliwicka, Katarzyna Nowak, Salma Balazadeh, Bernd Mueller-Roeber, Malgorzata D. Gaj

published 17 Jul 2013

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Systems Biology Analysis of Zymomonas mobilis ZM4 Ethanol Stress Responses

Shihui Yang, Chongle Pan, Timothy J. Tschaplinski, Gregory B. Hurst, Nancy L. Engle, Wen Zhou, PhuongAn Dam, Ying Xu, Miguel Rodriguez Jr, Lezlee Dice, Courtney M. Johnson, Brian H. Davison, Steven D. Brown

published 16 Jul 2013

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