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Transcriptome analysis

Network Theory Inspired Analysis of Time-Resolved Expression Data Reveals Key Players Guiding P. patens Stem Cell Development

Hauke Busch, Melanie Boerries, Jie Bao, Sebastian T. Hanke, Manuel Hiss, Theodhor Tiko, Stefan A. Rensing

published 18 Apr 2013

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Enhanced De Novo Assembly of High Throughput Pyrosequencing Data Using Whole Genome Mapping

Fatma Onmus-Leone, Jun Hang, Robert J. Clifford, Yu Yang, Matthew C. Riley, Robert A. Kuschner, Paige E. Waterman, Emil P. Lesho

published 17 Apr 2013

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Mechanisms of Intron Loss and Gain in the Fission Yeast Schizosaccharomyces

Tao Zhu, Deng-Ke Niu

published 17 Apr 2013

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Identification of Transcriptome SNPs for Assessing Allele-Specific Gene Expression in a Super-Hybrid Rice Xieyou9308

Rongrong Zhai, Yue Feng, Xiaodeng Zhan, Xihong Shen, Weiming Wu, Ping Yu, Yingxin Zhang, Daibo Chen, Huimin Wang, Zechuan Lin, Liyong Cao, Shihua Cheng

published 17 Apr 2013

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Transcriptome Analysis of Newt Lens Regeneration Reveals Distinct Gradients in Gene Expression Patterns

Konstantinos Sousounis, Mario Looso, Nobuyasu Maki, Clifford J. Ivester, Thomas Braun, Panagiotis A. Tsonis

published 16 Apr 2013

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Selection of New Appropriate Reference Genes for RT-qPCR Analysis via Transcriptome Sequencing of Cynomolgus Monkeys (Macaca fascicularis)

Sang-Je Park, Young-Hyun Kim, Jae-Won Huh, Sang-Rae Lee, Sang-Hyun Kim, Sun-Uk Kim, Ji-Su Kim, Kang-Jin Jeong, Kyoung-Min Kim, Heui-Soo Kim, Kyu-Tae Chang

published 15 Apr 2013

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Identification of Optimum Sequencing Depth Especially for De Novo Genome Assembly of Small Genomes Using Next Generation Sequencing Data

Aarti Desai, Veer Singh Marwah, Akshay Yadav, Vineet Jha, Kishor Dhaygude, Ujwala Bangar, Vivek Kulkarni, Abhay Jere

published 12 Apr 2013

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CGAP-Align: A High Performance DNA Short Read Alignment Tool

Yaoliang Chen, Ji Hong, Wanyun Cui, Jacques Zaneveld, Wei Wang, Richard Gibbs, Yanghua Xiao, Rui Chen

published 11 Apr 2013

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Nutrigenomics in Arma chinensis: Transcriptome Analysis of Arma chinensis Fed on Artificial Diet and Chinese Oak Silk Moth Antheraea pernyi Pupae

Deyu Zou, Thomas A. Coudron, Chenxi Liu, Lisheng Zhang, Mengqing Wang, Hongyin Chen

published 11 Apr 2013

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Transcriptomic Study Reveals Widespread Spliced Leader Trans-Splicing, Short 5′-UTRs and Potential Complex Carbon Fixation Mechanisms in the Euglenoid Alga Eutreptiella sp.

Rita C. Kuo, Huan Zhang, Yunyun Zhuang, Linda Hannick, Senjie Lin

published 09 Apr 2013

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Transcript and Protein Profiling Analysis of the Destruxin A-Induced Response in Larvae of Plutella xylostella

Pengfei Han, Fengliang Jin, Xiaolin Dong, Jiqiao Fan, Baoli Qiu, Shunxiang Ren

published 09 Apr 2013

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De novo Sequence Assembly and Characterization of Lycoris aurea Transcriptome Using GS FLX Titanium Platform of 454 Pyrosequencing

Ren Wang, Sheng Xu, Yumei Jiang, Jingwei Jiang, Xiaodan Li, Lijian Liang, Jia He, Feng Peng, Bing Xia

published 09 Apr 2013

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Whole Genome and Transcriptome Sequencing of a B3 Thymoma

Iacopo Petrini, Arun Rajan, Trung Pham, Donna Voeller, Sean Davis, James Gao, Yisong Wang, Giuseppe Giaccone

published 05 Apr 2013

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