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Transcriptome analysis

Deep Sequencing-Based Analysis of the Cymbidium ensifolium Floral Transcriptome

Xiaobai Li, Jie Luo, Tianlian Yan, Lin Xiang, Feng Jin, Dehui Qin, Chongbo Sun, Ming Xie

published 31 Dec 2013

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MIDDAS-M: Motif-Independent De Novo Detection of Secondary Metabolite Gene Clusters through the Integration of Genome Sequencing and Transcriptome Data

Myco Umemura, Hideaki Koike, Nozomi Nagano, Tomoko Ishii, Jin Kawano, Noriko Yamane, Ikuko Kozone, Katsuhisa Horimoto, Kazuo Shin-ya, Kiyoshi Asai, Jiujiang Yu, Joan W. Bennett, Masayuki Machida

published 31 Dec 2013

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Dynamic Expression of Long Non-Coding RNAs (lncRNAs) in Adult Zebrafish

Kriti Kaushik, Vincent Elvin Leonard, Shamsudheen KV, Mukesh Kumar Lalwani, Saakshi Jalali, Ashok Patowary, Adita Joshi, Vinod Scaria, Sridhar Sivasubbu

published 31 Dec 2013

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Assessment of the Geographic Origins of Pinewood Nematode Isolates via Single Nucleotide Polymorphism in Effector Genes

Joana Figueiredo, Maria José Simões, Paula Gomes, Cristina Barroso, Diogo Pinho, Luci Conceição, Luís Fonseca, Isabel Abrantes, Miguel Pinheiro, Conceição Egas

published 31 Dec 2013

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Early Gene Expression Analysis in 9L Orthotopic Tumor-Bearing Rats Identifies Immune Modulation in Molecular Response to Synchrotron Microbeam Radiation Therapy

Audrey Bouchet, Nathalie Sakakini, Michèle El Atifi, Céline Le Clec'h, Elke Brauer, Anaïck Moisan, Pierre Deman, Pascal Rihet, Géraldine Le Duc, Laurent Pelletier

published 31 Dec 2013

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Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

Thomas P. van Gurp, Lauren M. McIntyre, Koen J. F. Verhoeven

published 30 Dec 2013

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Transcriptome Analysis of Nodes and Buds from High and Low Tillering Switchgrass Inbred Lines

Yixing Wang, Xin Zeng, Lila Peal, Yuhong Tang, Yanqi Wu, Ramamurthy Mahalingam

published 30 Dec 2013

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Random or Stochastic Monoallelic Expressed Genes Are Enriched for Neurodevelopmental Disorder Candidate Genes

Aaron R. Jeffries, David A. Collier, Evangelos Vassos, Sarah Curran, Caroline M. Ogilvie, Jack Price

published 27 Dec 2013

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Transcriptome Analysis in Cotton Boll Weevil (Anthonomus grandis) and RNA Interference in Insect Pests

Alexandre Augusto Pereira Firmino, Fernando Campos de Assis Fonseca, Leonardo Lima Pepino de Macedo, Roberta Ramos Coelho, José Dijair Antonino de Souza Jr, Roberto Coiti Togawa, Orzenil Bonfim Silva-Junior, Georgios Joannis Pappas-Jr, Maria Cristina Mattar da Silva, Gilbert Engler, Maria Fatima Grossi-de-Sa

published 27 Dec 2013

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Suppression of Molecular Inflammatory Pathways by Toll-Like Receptor 7, 8, and 9 Antagonists in a Model of IL-23-Induced Skin Inflammation

Mayte Suárez-Fariñas, Robert Arbeit, Weiwen Jiang, Francesca S. Ortenzio, Tim Sullivan, James G. Krueger

published 27 Dec 2013

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De novo Sequencing, Characterization, and Comparison of Inflorescence Transcriptomes of Cornus canadensis and C. florida (Cornaceae)

Jian Zhang, Robert G. Franks, Xiang Liu, Ming Kang, Jonathan E. M. Keebler, Jennifer E. Schaff, Hong-Wen Huang, Qiu-Yun (Jenny) Xiang

published 27 Dec 2013

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An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis

Cristian Del Fabbro, Simone Scalabrin, Michele Morgante, Federico M. Giorgi

published 23 Dec 2013

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Next-Generation Sequencing of Lung Cancer EGFR Exons 18-21 Allows Effective Molecular Diagnosis of Small Routine Samples (Cytology and Biopsy)

Dario de Biase, Michela Visani, Umberto Malapelle, Francesca Simonato, Valentina Cesari, Claudio Bellevicine, Annalisa Pession, Giancarlo Troncone, Ambrogio Fassina, Giovanni Tallini

published 23 Dec 2013

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