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Transcriptome analysis

Gene Expression Profiling of Development and Anthocyanin Accumulation in Kiwifruit (Actinidia chinensis) Based on Transcriptome Sequencing

Wenbin Li, Yifei Liu, Shaohua Zeng, Gong Xiao, Gan Wang, Ying Wang, Ming Peng, Hongwen Huang

published 24 Aug 2015

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Development and Validation of a Next-Generation Sequencing Assay for BRCA1 and BRCA2 Variants for the Clinical Laboratory

Charles M. Strom, Steven Rivera, Christopher Elzinga, Taraneh Angeloni, Sun Hee Rosenthal, Dana Goos-Root, Martin Siaw, Jamie Platt, Cory Braastadt, Linda Cheng, David Ross, Weimin Sun

published 21 Aug 2015

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Virus-Induced Gene Silencing Using Tobacco Rattle Virus as a Tool to Study the Interaction between Nicotiana attenuata and Rhizophagus irregularis

Karin Groten, Nabin T. Pahari, Shuqing Xu, Maja Miloradovic van Doorn, Ian T. Baldwin

published 20 Aug 2015

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Detection and Tracking of NY-ESO-1-Specific CD8⁺ T Cells by High-Throughput T Cell Receptor β (TCRB) Gene Rearrangements Sequencing in a Peptide-Vaccinated Patient

Manami Miyai, Shingo Eikawa, Akihiro Hosoi, Tamaki Iino, Hirokazu Matsushita, Midori Isobe, Akiko Uenaka, Heiichiro Udono, Jun Nakajima, Eiichi Nakayama, Kazuhiro Kakimi

published 20 Aug 2015

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Transcriptome Analysis of Liangshan Pig Muscle Development at the Growth Curve Inflection Point and Asymptotic Stages Using Digital Gene Expression Profiling

Linyuan Shen, Jia Luo, Jingjing Du, Chendong Liu, Xiaoqian Wu, Qiang Pu, Yuhua Fu, Qianzi Tang, Yuanrui Liu, Qiang Li, Runlin Yang, Xuewei Li, Guoqing Tang, Yanzhi Jiang, Mingzhou Li, Shunhua Zhang, Li Zhu

published 20 Aug 2015

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CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data

Rituparna Sinha, Sandip Samaddar, Rajat K. De

published 20 Aug 2015

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Candidate Resistant Genes of Sand Pear (Pyrus pyrifolia Nakai) to Alternaria alternata Revealed by Transcriptome Sequencing

Xiaoping Yang, Hongju Hu, Dazhao Yu, Zhonghai Sun, Xiujuan He, Jingguo Zhang, Qiliang Chen, Rui Tian, Jing Fan

published 20 Aug 2015

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Development of Genomic Microsatellite Markers in Carthamus tinctorius L. (Safflower) Using Next Generation Sequencing and Assessment of Their Cross-Species Transferability and Utility for Diversity Analysis

Heena Ambreen, Shivendra Kumar, Murali Tottekkad Variath, Gopal Joshi, Sapinder Bali, Manu Agarwal, Amar Kumar, Arun Jagannath, Shailendra Goel

published 19 Aug 2015

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Assembly and Analysis of Differential Transcriptome Responses of Hevea brasiliensis on Interaction with Microcyclus ulei

Uriel Alonso Hurtado Páez, Ibonne Aydee García Romero, Silvia Restrepo Restrepo, Fabio Ancizar Aristizábal Gutiérrez, Dolly Montoya Castaño

published 19 Aug 2015

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De Novo Transcriptome Analysis of Allium cepa L. (Onion) Bulb to Identify Allergens and Epitopes

Hemalatha Rajkumar, Ramesh Kumar Ramagoni, Vijayendra Chary Anchoju, Raju Naik Vankudavath, Arshi Uz Zaman Syed

published 18 Aug 2015

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Evaluating the Hypoxia Response of Ruffe and Flounder Gills by a Combined Proteome and Transcriptome Approach

Jessica Tiedke, Janus Borner, Hendrik Beeck, Marcel Kwiatkowski, Hanno Schmidt, Ralf Thiel, Andrej Fabrizius, Thorsten Burmester

published 14 Aug 2015

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Next Generation Sequencing Analysis Reveals Segmental Patterns of microRNA Expression in Mouse Epididymal Epithelial Cells

Brett Nixon, Simone J. Stanger, Bettina P. Mihalas, Jackson N. Reilly, Amanda L. Anderson, Matthew D. Dun, Sonika Tyagi, Janet E. Holt, Eileen A. McLaughlin

published 13 Aug 2015

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Efficient Estimation of Mutation Rates during Individual Development by Minimization of Chi-Square

Shi-Meng Ai, Jian-Jun Gao, Shu-Qun Liu, Yun-Xin Fu

published 12 Aug 2015

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