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Transcriptome analysis

CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data

Rituparna Sinha, Sandip Samaddar, Rajat K. De

published 20 Aug 2015

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Candidate Resistant Genes of Sand Pear (Pyrus pyrifolia Nakai) to Alternaria alternata Revealed by Transcriptome Sequencing

Xiaoping Yang, Hongju Hu, Dazhao Yu, Zhonghai Sun, Xiujuan He, Jingguo Zhang, Qiliang Chen, Rui Tian, Jing Fan

published 20 Aug 2015

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Development of Genomic Microsatellite Markers in Carthamus tinctorius L. (Safflower) Using Next Generation Sequencing and Assessment of Their Cross-Species Transferability and Utility for Diversity Analysis

Heena Ambreen, Shivendra Kumar, Murali Tottekkad Variath, Gopal Joshi, Sapinder Bali, Manu Agarwal, Amar Kumar, Arun Jagannath, Shailendra Goel

published 19 Aug 2015

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Assembly and Analysis of Differential Transcriptome Responses of Hevea brasiliensis on Interaction with Microcyclus ulei

Uriel Alonso Hurtado Páez, Ibonne Aydee García Romero, Silvia Restrepo Restrepo, Fabio Ancizar Aristizábal Gutiérrez, Dolly Montoya Castaño

published 19 Aug 2015

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De Novo Transcriptome Analysis of Allium cepa L. (Onion) Bulb to Identify Allergens and Epitopes

Hemalatha Rajkumar, Ramesh Kumar Ramagoni, Vijayendra Chary Anchoju, Raju Naik Vankudavath, Arshi Uz Zaman Syed

published 18 Aug 2015

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Evaluating the Hypoxia Response of Ruffe and Flounder Gills by a Combined Proteome and Transcriptome Approach

Jessica Tiedke, Janus Borner, Hendrik Beeck, Marcel Kwiatkowski, Hanno Schmidt, Ralf Thiel, Andrej Fabrizius, Thorsten Burmester

published 14 Aug 2015

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Next Generation Sequencing Analysis Reveals Segmental Patterns of microRNA Expression in Mouse Epididymal Epithelial Cells

Brett Nixon, Simone J. Stanger, Bettina P. Mihalas, Jackson N. Reilly, Amanda L. Anderson, Matthew D. Dun, Sonika Tyagi, Janet E. Holt, Eileen A. McLaughlin

published 13 Aug 2015

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Efficient Estimation of Mutation Rates during Individual Development by Minimization of Chi-Square

Shi-Meng Ai, Jian-Jun Gao, Shu-Qun Liu, Yun-Xin Fu

published 12 Aug 2015

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Large-Scale Transcriptome Analysis in Faba Bean (Vicia faba L.) under Ascochyta fabae Infection

Sara Ocaña, Pedro Seoane, Rocio Bautista, Carmen Palomino, Gonzalo M. Claros, Ana M. Torres, Eva Madrid

published 12 Aug 2015

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Transcriptomic Analysis of Paeonia delavayi Wild Population Flowers to Identify Differentially Expressed Genes Involved in Purple-Red and Yellow Petal Pigmentation

Qianqian Shi, Lin Zhou, Yan Wang, Kui Li, Baoqiang Zheng, Kun Miao

published 12 Aug 2015

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Uncovering the Differential Molecular Basis of Adaptive Diversity in Three Echinochloa Leaf Transcriptomes

Gyoungju Nah, Ji-Hoon Im, Jin-Won Kim, Hae-Rim Park, Min-Jung Yook, Tae-Jin Yang, Albert J. Fischer, Do-Soon Kim

published 12 Aug 2015

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Validation of Next-Generation Sequencing of Entire Mitochondrial Genomes and the Diversity of Mitochondrial DNA Mutations in Oral Squamous Cell Carcinoma

Anita Kloss-Brandstätter, Hansi Weissensteiner, Gertraud Erhart, Georg Schäfer, Lukas Forer, Sebastian Schönherr, Dominic Pacher, Christof Seifarth, Andrea Stöckl, Liane Fendt, Irma Sottsas, Helmut Klocker, Christian W. Huck, Michael Rasse, Florian Kronenberg, Frank R. Kloss

published 11 Aug 2015

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Transcriptomic Profiling and H3K27me3 Distribution Reveal Both Demethylase-Dependent and Independent Regulation of Developmental Gene Transcription in Cell Differentiation

Sung Chul Kang, Se Kye Kim, Jin Choul Chai, Sun Hwa Kim, Kyoung-Jae Won, Young Seek Lee, Kyoung Hwa Jung, Young Gyu Chai

published 11 Aug 2015

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