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Transcriptome analysis

Cell death-related gene signatures as dual-function biomarkers: Early diagnosis and therapeutic targeting in Staphylococcus aureus pneumonia

Cao Qing, Wanjuan Sun, [ ... ], Lu Lin

Integrative pan-resistome and transcriptomic characterization reveals differential gene expression signatures in carbapenem-resistant Acinetobacter baumannii: Insights into efflux pump regulation and therapeutic targeting strategies

Mohanraj Gopikrishnan, George Priya Doss C

Comprehensive transcriptome and metabolome analysis to exploration the effects of TCs on GCs lipid metabolism at goose pre-ovulatory follicle

Jisi Ma, Wenqiang Sun, [ ... ], Xiang Gan

GelInsight: Open-source software for large-sample DNA fragmentation quality control in gel electrophoresis images

Kathlyne Jayne B. Bautista, Marjan Mehrab-Mohseni, [ ... ], Samantha G. Pattenden

Manual curation for improved genome annotation of the functionally extinct northern white rhinoceros (Ceratotherium simum cottoni)

Elena Ruggeri, Julien Prunier, [ ... ], Kristin Klohonatz

Cold plasma-induced transcriptomic reprogramming and alternative splicing in tomato plants infected with ToBRFV

Mahsa Rostami, Abozar Ghorbani, Davoud Koolivand, Abolfazl Mazandarani

A non-invasive urinary diagnostic signature for diabetic kidney disease revealed by machine learning and single-cell analysis

Yonggang Chen, Jintai Luo, [ ... ], Xiaobing Liu

Evaluation of RNA extraction and rRNA depletion protocols for RNA-Seq in eleven edible seaweed species from brown, red, and green algae

Rob J. Dekker, Wim A. Ensink, [ ... ], Timo M. Breit

Next-Gen intestinal parasite detection: Leveraging metataxonomics for improved diagnosis of intestinal protists and helminths

Katherine Bedoya-Urrego, Nicolas Rozo-Montoya, [ ... ], Juan F. Alzate

Integrated transcriptome and metabolome analysis of melanin-related genes and metabolites in Muchuan Black Bones Chickens

Liu Wei, Jie Hong-Wei, [ ... ], Ye Fei

Single-cell RNA-seq data normalization: A benchmarking study

Qinyu Ge, Yuqi Sheng, [ ... ], Min Pan

Co-regulation of microglial subgroups in Alzheimer’s amyloid pathology: Implications for diagnosis and drug development

Yu Zhou, Yukuan Huang, Yangchang Fan, Feng Xue

Decoding the distinct immune landscape and possible regulatory mechanisms of autoimmune hepatitis through integrated single-cell and bulk RNA sequencing

Gang Chi, Yijia Che, [ ... ], Junmei Wang

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