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Transcriptome analysis

GLM-based optimization of NGS data analysis: A case study of Roche 454, Ion Torrent PGM and Illumina NextSeq sequencing data

Sarah Sandmann, Aniek O. de Graaf, [ ... ], Martin Dugas

De novo transcriptome analysis and microsatellite marker development for population genetic study of a serious insect pest, Rhopalosiphum padi (L.) (Hemiptera: Aphididae)

Xinle Duan, Kang Wang, [ ... ], Maohua Chen

Transcriptome using Illumina sequencing reveals the traits of spermatogenesis and developing testes in Eriocheir sinensis

Gen-Liang Li, Hui Qian

Hepatic transcriptome analysis and identification of differentially expressed genes response to dietary oxidized fish oil in loach Misgurnus anguillicaudatus

Yin Zhang, Yang Li, [ ... ], Jian Gao

De novo assembly of the sea trout (Salmo trutta m. trutta) skin transcriptome to identify putative genes involved in the immune response and epidermal mucus secretion

Magdalena Malachowicz, Roman Wenne, Artur Burzynski

High-quality RNA extraction from the sea urchin Paracentrotus lividus embryos

Nadia Ruocco, Susan Costantini, [ ... ], Maria Costantini

A novel hypothesis-unbiased method for Gene Ontology enrichment based on transcriptome data

Mario Fruzangohar, Esmaeil Ebrahimie, David L. Adelson

De novo assembly, characterization and annotation for the transcriptome of Sarcocheilichthys sinensis

Chuankun Zhu, Zhengjun Pan, [ ... ], Huaiyu Ding

Transcriptomic, cellular and life-history responses of Daphnia magna chronically exposed to benzotriazoles: Endocrine-disrupting potential and molting effects

Maeva Giraudo, Mélanie Douville, Guillaume Cottin, Magali Houde

Transcriptome analysis of two recombinant inbred lines of common bean contrasting for symbiotic nitrogen fixation

Kelvin Kamfwa, Dongyan Zhao, James D. Kelly, Karen A. Cichy

Transcriptome analysis of hexaploid hulless oat in response to salinity stress

Bin Wu, Yani Hu, [ ... ], Zongwen Zhang

A novel RNA sequencing data analysis method for cell line authentication

Erik Fasterius, Cinzia Raso, [ ... ], Cristina Al-Khalili Szigyarto

KrillDB: A de novo transcriptome database for the Antarctic krill (Euphausia superba)

Gabriele Sales, Bruce E. Deagle, [ ... ], Simon Jarman

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