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Transcriptome analysis

NMD Classifier: A reliable and systematic classification tool for nonsense-mediated decay events

Min-Kung Hsu, Hsuan-Yu Lin, Feng-Chi Chen

Deep sequencing is an appropriate tool for the selection of unique Hepatitis C virus (HCV) variants after single genomic amplification

Thibault Guinoiseau, Alain Moreau, [ ... ], Catherine Gaudy-Graffin

An in vitro model of intestinal infection reveals a developmentally regulated transcriptome of Toxoplasma sporozoites and a NF-κB-like signature in infected host cells

Pascale S. Guiton, Janelle M. Sagawa, Heather M. Fritz, John C. Boothroyd

Halvade-RNA: Parallel variant calling from transcriptomic data using MapReduce

Dries Decap, Joke Reumers, [ ... ], Jan Fostier

Opening the treasure chest: A DNA-barcoding primer set for most higher taxa of Central European birds and mammals from museum collections

Sylvia Schäffer, Frank E. Zachos, Stephan Koblmüller

Enhancement of Arabidopsis growth characteristics using genome interrogation with artificial transcription factors

Niels van Tol, Martijn Rolloos, [ ... ], Bert J. van der Zaal

Epigenetic silencing of V(D)J recombination is a major determinant for selective differentiation of mucosal-associated invariant t cells from induced pluripotent stem cells

Yutaka Saito, Chie Sugimoto, Toutai Mituyama, Hiroshi Wakao

Specific expression of novel long non-coding RNAs in high-hyperdiploid childhood acute lymphoblastic leukemia

Mathieu Lajoie, Simon Drouin, [ ... ], Daniel Sinnett

Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae

Margarita Ros, Iulia Raut, Ana Belén Santisima-Trinidad, Jose Antonio Pascual

Improving transcriptome de novo assembly by using a reference genome of a related species: Translational genomics from oil palm to coconut

Alix Armero, Luc Baudouin, Stéphanie Bocs, Dominique This

Genome-wide analysis of brain and gonad transcripts reveals changes of key sex reversal-related genes expression and signaling pathways in three stages of Monopterus albus

Wei Chi, Yu Gao, [ ... ], Dapeng Li

Peptidomic and transcriptomic profiling of four distinct spider venoms

Vera Oldrati, Dominique Koua, [ ... ], Reto Stöcklin

Identification of marginal causal relationships in gene networks from observational and interventional expression data

Gilles Monneret, Florence Jaffrézic, [ ... ], Grégory Nuel

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