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Transcriptome analysis

Integrative bioinformatics analysis identifies gut microbiota-derived metabolite-associated immune candidate targets in high-risk primary biliary cholangitis

Jing Feng, Zhiyun Liu, Huanna Sun

Integrating dynamic modeling of signaling pathways with subject-specific transcriptomic data to assess breast cancer risk

Piyanut Ratphibun Yamashita, Anuwat Tangthanawatsakul, [ ... ], Teeraphan Laomettachit

Unraveling the molecular Nexus of Alzheimer’s Disease and HIV encephalitis: The role of cellular senescence and transcriptional regulation

Hao Zhang, WenJun Chen, [ ... ], GuoXun Shi

Integration of RNA-seq and scRNA-seq to investigate the role of cell cycle-related biomarkers in sepsis

Mei-Ping Zheng, Yan-Ling Du, [ ... ], Xiao-Tan Gao

Effects of neem extract on Artemia franciscana: Insights from high-throughput transcriptomics and phenotypic analysis

Rodolfo Farlora, Paulina Bustos, [ ... ], Kathleen Whitlock

A course-undergraduate research experience (CURE) to explore the effect of structural variants on gene expression in C. elegans balancers

Tatiana Maroilley, Victoria Rodrigues Alves Barbosa, [ ... ], Maja Tarailo-Graovac

Fumarate-associated immunometabolic network in Periodontitis revealed by integrated transcriptomic and single-cell RNA sequencing analysis

Rongpeng Liu, Jinfeng Lv, [ ... ], Chan Zhou

Spatially localized immune metaprograms reveal micro-niche organization in the human Dorsal Root Ganglion

Kyuhyung Choi, Kaehong Lee, Baeki E. Kang, Tae-Min Kim

Association of IGHG1 with carotid plaque progression and NK Cell-related immune features: Insights from bulk and single-cell transcriptomics

Lun Shen, Yang Liu, [ ... ], Yunfei Bao

Integrative multi-omics and machine learning identify CHRNA1 putative circadian-immune hub in COPD

Lan Zhang, Zhifei Li, [ ... ], Kaiyu Han

Integrated transcriptomic analysis of LMB2-induced podocyte injury identifies conserved inflammatory and adaptive stress responses

Mohammad-Reza Esmaeili, Marjan Nejati, [ ... ], Sara Taleahmad

EPAS1 knockdown is associated with cell cycle and DNA replication programs and MYC/E2F-related signatures in hemangioma endothelial cells

Zheren Su, Luying Wang, [ ... ], Ran Huo

Breast cancer clustering integrating complete gene expression profiles and genetic ancestry

Johanna Stepanian, Alejandro Mejia-Garcia, Carlos Orozco, Jorge Duitama

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