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Transcriptome analysis

Protocol: A multi-factorial, multi-centre study, for biomarker identification in healthy controls for comparison to babies with moderate-severe NESHIE

Carina C. Babbo, Jeanne van Rensburg, Juanita Mellet, Sithembiso C. Velaphi, Firdose L. Nakwa, Mogomane Y.K. Masemola, Gugulabatembunamahlubi T.J. Kali, Caroline J. Foden, Solize Oosthuizen-Vosloo, Vedarsha Chellan, Odireleng Mosuwe, Priyal Mistry, Ariel R.M. Buyens, Fatima Barmania, Shakti Pillay, Daynia E. Ballot, Melantha Coetzee, Alan R. Horn, Colleen Wright, Pawel T. Schubertand, Michael S. Pepper

published 08 Apr 2026

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Analysis of morphological, morphokinetics, cell-free DNA, microRNAs parameters to predict aneuploidy status of embryos

Achmad Kemal Harzif, Intan Indah Permatasari, Patricia Alika Kurniawan, Thalia Amila Elsiyana, Fistyanisa Elya Charilda, Azizah Fitriayu Andyra, Heidi Dewi Mutia, Nafi’atul Ummah, Putri Nurbaeti, Amalia Shadrina, Pritta Ameilia Iffanolida, Kresna Mutia, Ririn Rahmala Febri, Retno Asti Werdhani, Dwi Anita Suryandari, Wisnu Jatmiko, Arief Boediono, Hartanto Bayuaji, R. Muharam Natadisastra, Budi Wiweko

published 02 Apr 2026

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Hepatic transcriptomic responses in gravid and non-gravid rats exposed to HFPO-DA: Analyses to inform the role of maternal effects in neonatal toxicity

Melissa M. Heintz, Chad M. Thompson, Jeffrey C. Wolf, John M. Rogers, Laurie C. Haws

published 01 Apr 2026

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Integrated transcriptome and single-cell sequencing analysis identify blood-pancreas shared lncRNA biomarkers in new-onset T2DM

Yan Wang, Yangming Qu, Mingxin Dong, Yulong Zhang, Na Zhao, Suli Song, Mingyang Huo, Nan Lu, Baichuan Chen, Chengbiao Sun, Kaikai Yu, Juan Ren, Na Xu, Wensen Liu, Yan Yao

published 31 Mar 2026

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Transcriptional regulation in skeletal muscle and adipose tissue of lean and obese colony cats

Rahel Rigotti, Annette Liesegang, Holly Dawson, Daniel Brugger, Diana Frey, Georgina Samaha, Bianca Haase, Brigitta Wichert

published 27 Mar 2026

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Transcriptional and functional characterization of terpene synthase genes of the aromatic plant Plectranthus hadiensis

Hinano Mizuno, Kenro Tokuhiro, Koichiro Iwai, Yoshikazu Furuta, Akari Nakasone, Hidenori Tanaka, Hiroki Sugimoto

published 23 Mar 2026

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Quantitative profiling of lifespan-dependent cell-cell communication potential reveals dynamic ligand-receptor network shifts across mouse tissues

Boyong Wei, Evan P. Troendle, David A. Simpson, Alan W. Stitt

published 20 Mar 2026

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Hippocampal transcriptome profiling reveals status epilepticus-induced early changes in gene expression mainly implicating in neuroinflammation and immune responses linked to microglial dysfunction

Hui-Ling Tang, Yu Min, Yue-Sheng Long

published 20 Mar 2026

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The effect of cold ischemia time on hypoxia, EMT, and apoptosis pathways in normal colon mucosa

Katarzyna Duzowska, Mikołaj Opiełka, Kinga Drężek-Chyła, Anna Kostecka, Monika Horbacz, Jarosław Skokowski, Olga Rostkowska, Jarosław Kobiela, Leszek Kalinowski, Jan P. Dumanski, Arkadiusz Piotrowski, Marcin Jąkalski, Natalia Filipowicz

published 20 Mar 2026

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Non-invasive host transcriptome and HPV oncogene expression map the molecular landscape of HPV-driven cervical lesions

Mohamad Ammar Ayass, Naila Zaman, Natalya Griko, Victor Pashkov, Kevin Zhu, Ghulam Abbas, Melesse Ghelan, Ramya Ramankutty Nair, Tutku Okyay, Jin Zhang, Lina Abi-Mosleh

published 19 Mar 2026

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Multi-omics analysis identifies CCNB1 as a cell cycle factor driving glioblastoma progression and its inhibition by resveratrol

Bohan Liu, Dazhao Peng, Yankun Chen, Qiuling Li, Yuedong Hu, Shiyu Liu, Huimin Hu

published 16 Mar 2026

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TSSpredator-Web: A web-application for transcription start site prediction and exploration

Mathias Witte Paz, Alexander Herbig, Kay Nieselt

published 13 Mar 2026

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Lessons learned from manual curation of thousands of gene models in the nematode Pristionchus pacificus

Christian Rödelsperger, Neha Agyal, Shiela Pearl Quiobe, Hao Wu, Waltraud Röseler, Dafne Ibarra-Morales, Ralf J. Sommer

published 12 Mar 2026

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