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Transcriptome analysis

HSRA: Hadoop-based spliced read aligner for RNA sequencing data

Roberto R. Expósito, Jorge González-Domínguez, Juan Touriño

Detection of new pathways involved in the acceptance and the utilisation of a plant-based diet in isogenic lines of rainbow trout fry

Thérèse Callet, Mathilde Dupont-Nivet, [ ... ], Françoise Médale

Automated size selection for short cell-free DNA fragments enriches for circulating tumor DNA and improves error correction during next generation sequencing

Sabine Hellwig, David A. Nix, [ ... ], Hunter R. Underhill

Investigation of epigenetic regulatory networks associated with autism spectrum disorder (ASD) by integrated global LINE-1 methylation and gene expression profiling analyses

Chayanin Tangsuwansri, Thanit Saeliw, [ ... ], Tewarit Sarachana

An annotated CNS transcriptome of the medicinal leech, Hirudo verbana: De novo sequencing to characterize genes associated with nervous system activity

Adam J. Northcutt, Eva K. Fischer, [ ... ], David J. Schulz

Identification of a putative polyketide synthase gene involved in usnic acid biosynthesis in the lichen Nephromopsis pallescens

Yi Wang, Changan Geng, [ ... ], Changtian Li

Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis

Megan Hastings Hagenauer, Anton Schulmann, [ ... ], Huda Akil

Comparative analysis of the male inflorescence transcriptome profiles of an ms22 mutant of maize

Yonggang Gao, LiJuan Zhang, ShengChao Zhao, Yuanxin Yan

A new targeted capture method using bacterial artificial chromosome (BAC) libraries as baits for sequencing relatively large genes

Kae Koganebuchi, Takashi Gakuhari, [ ... ], Hiroki Oota

De novo assembly of a transcriptome for the cricket Gryllus bimaculatus prothoracic ganglion: An invertebrate model for investigating adult central nervous system compensatory plasticity

Harrison P. Fisher, Micah G. Pascual, [ ... ], Hadley W. Horch

A transcriptome study on Macrobrachium nipponense hepatopancreas experimentally challenged with white spot syndrome virus (WSSV)

Caiyuan Zhao, Hongtuo Fu, [ ... ], Yongsheng Gong

Gene expression analysis of porcine whole blood cells infected with foot-and-mouth disease virus using high-throughput sequencing technology

Jianliang Lv, Yaozhong Ding, [ ... ], Yonghao Hu

Comparative transcriptome analysis provides global insight into gene expression differences between two orchid cultivars

Yu Jiang, Hai-Yan Song, [ ... ], Jia Liu

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