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Transcriptome analysis

Integrated routine workflow using next-generation sequencing and a fully-automated platform for the detection of KRAS, NRAS and BRAF mutations in formalin-fixed paraffin embedded samples with poor DNA quality in patients with colorectal carcinoma

Claire Franczak, Ludovic Dubouis, [ ... ], Alexandre Harlé

Provir/Latitude 45 study: A step towards a multi-epitopic CTL vaccine designed on archived HIV-1 DNA and according to dominant HLA I alleles

Camille Tumiotto, Bruna M. Alves, [ ... ], Hervé Fleury

Isolating pulmonary microvascular endothelial cells ex vivo: Implications for pulmonary arterial hypertension, and a caution on the use of commercial biomaterials

Bradley M. Wertheim, Yi-Dong Lin, [ ... ], Bradley A. Maron

Molecular characterization of Histomonas meleagridis exoproteome with emphasis on protease secretion and parasite-bacteria interaction

Rounik Mazumdar, Katharina Nöbauer, [ ... ], Ivana Bilic

Comparative analysis of the transcriptome of the Amazonian fish species Colossoma macropomum (tambaqui) and hybrid tambacu by next generation sequencing

Fátima Gomes, Luciana Watanabe, [ ... ], Iracilda Sampaio

Extraction-free whole transcriptome gene expression analysis of FFPE sections and histology-directed subareas of tissue

Christy L. Trejo, Miloš Babić, [ ... ], Bruce E. Seligmann

Comparative transcriptomic analysis reveals genes regulating the germination of morphophysiologically dormant Paris polyphylla seeds during a warm stratification

Dengqun Liao, Juan Zhu, [ ... ], Jianjun Qi

The responses of lungs and adjacent lymph nodes in responding to Yersinia pestis infection: A transcriptomic study using a non-human primate model

Nabarun Chakraborty, Aarti Gautam, [ ... ], Rasha Hammamieh

Viral infection detection using metagenomics technology in six poultry farms of eastern China

Yuan Qiu, Suchun Wang, [ ... ], Kaicheng Wang

Presence, persistence and effects of pre-treatment HIV-1 drug resistance variants detected using next generation sequencing: A Retrospective longitudinal study from rural coastal Kenya

Amin S. Hassan, David F. Bibby, [ ... ], James A. Berkley

Testing of library preparation methods for transcriptome sequencing of real life glioblastoma and brain tissue specimens: A comparative study with special focus on long non-coding RNAs

Marek Vecera, Jiri Sana, [ ... ], Ondrej Slaby

Comparative analysis reveals a role for TGF-β in shaping the residency-related transcriptional signature in tissue-resident memory CD8⁺ T cells

Artika P. Nath, Asolina Braun, [ ... ], Michael Inouye

Transcriptomic analysis of cultivated cotton Gossypium hirsutum provides insights into host responses upon whitefly-mediated transmission of cotton leaf curl disease

Rubab Zahra Naqvi, Syed Shan-e-Ali Zaidi, [ ... ], Shahid Mansoor

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