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Transcriptome analysis

A Seriation Approach for Visualization-Driven Discovery of Co-Expression Patterns in Serial Analysis of Gene Expression (SAGE) Data

Olena Morozova, Vyacheslav Morozov, [ ... ], Marco A. Marra

Extensive Adaptive Changes Occur in the Transcriptome of Streptococcus agalactiae (Group B Streptococcus) in Response to Incubation with Human Blood

Laurent Mereghetti, Izabela Sitkiewicz, Nicole M. Green, James M. Musser

A Resource for Transcriptomic Analysis in the Mouse Brain

Charles Plessy, Michela Fagiolini, [ ... ], Piero Carninci

Extreme Clonality in Lymphoblastoid Cell Lines with Implications for Allele Specific Expression Analyses

Vincent Plagnol, Elif Uz, [ ... ], John A. Todd

Remodeling of the Streptococcus agalactiae Transcriptome in Response to Growth Temperature

Laurent Mereghetti, Izabela Sitkiewicz, Nicole M. Green, James M. Musser

Functional Annotation and Identification of Candidate Disease Genes by Computational Analysis of Normal Tissue Gene Expression Data

Laura Miozzi, Rosario Michael Piro, [ ... ], Paolo Provero

EST Analysis of Ostreococcus lucimarinus, the Most Compact Eukaryotic Genome, Shows an Excess of Introns in Highly Expressed Genes

William Lanier, Ahmed Moustafa, Debashish Bhattacharya, Josep M. Comeron

Uncovering Genes with Divergent mRNA-Protein Dynamics in Streptomyces coelicolor

Karthik P. Jayapal, Robin J. Philp, [ ... ], Wei-Shou Hu

Modeling Transcriptome Based on Transcript-Sampling Data

Jiang Zhu, Fuhong He, Jing Wang, Jun Yu

A New Perspective on Transcriptional System Regulation (TSR): Towards TSR Profiling

Rudolf S. N. Fehrmann, Hendrik J. M. de Jonge, [ ... ], Eveline S. J. M. de Bont

Probing Host Pathogen Cross-Talk by Transcriptional Profiling of Both Mycobacterium tuberculosis and Infected Human Dendritic Cells and Macrophages

Ludovic Tailleux, Simon J. Waddell, [ ... ], Olivier Neyrolles

Microarray Analysis in the Archaeon Halobacterium salinarum Strain R1

Jens Twellmeyer, Andy Wende, [ ... ], Dieter Oesterhelt

Indexing Strategies for Rapid Searches of Short Words in Genome Sequences

Christian Iseli, Giovanna Ambrosini, Philipp Bucher, C. Victor Jongeneel

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