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Transcriptome analysis

Diurnal Rhythms Result in Significant Changes in the Cellular Protein Complement in the Cyanobacterium Cyanothece 51142

Jana Stöckel, Jon M. Jacobs, [ ... ], Himadri B. Pakrasi

Differential Expression of Non-Coding RNAs and Continuous Evolution of the X Chromosome in Testicular Transcriptome of Two Mouse Species

David Homolka, Robert Ivanek, Jiri Forejt, Petr Jansa

Comparative Functional Genomics of Salt Stress in Related Model and Cultivated Plants Identifies and Overcomes Limitations to Translational Genomics

Diego H. Sanchez, Fernando L. Pieckenstain, [ ... ], Michael K. Udvardi

Systematic Evaluation of Three microRNA Profiling Platforms: Microarray, Beads Array, and Quantitative Real-Time PCR Array

Bin Wang, Paul Howel, [ ... ], Yaguang Xi

A PXR-Mediated Negative Feedback Loop Attenuates the Expression of CYP3A in Response to the PXR Agonist Pregnenalone-16α-Carbonitrile

Ian Bailey, G. Gordon Gibson, [ ... ], Nick Plant

Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

Schraga Schwartz, Ram Oren, Gil Ast

Mayday SeaSight: Combined Analysis of Deep Sequencing and Microarray Data

Florian Battke, Kay Nieselt

Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling

Felix Krueger, Simon R. Andrews, Cameron S. Osborne

Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing

Sebastian Jaenicke, Christina Ander, [ ... ], Alexander Goesmann

Candidate Genes Detected in Transcriptome Studies Are Strongly Dependent on Genetic Background

Pernille Sarup, Jesper G. Sørensen, [ ... ], Peter Sørensen

Transcriptomic Signatures of Ash (Fraxinus spp.) Phloem

Xiaodong Bai, Loren Rivera-Vega, [ ... ], Omprakash Mittapalli

Whole Transcriptome Sequencing Reveals Gene Expression and Splicing Differences in Brain Regions Affected by Alzheimer's Disease

Natalie A. Twine, Karolina Janitz, Marc R. Wilkins, Michal Janitz

Transcriptomics of the Bed Bug (Cimex lectularius)

Xiaodong Bai, Praveen Mamidala, [ ... ], Omprakash Mittapalli

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