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Sequencing techniques

Vortex fluidics-mediated DNA rescue from formalin-fixed museum specimens

Christian A. Totoiu, Jessica M. Phillips, Aspen T. Reese, Sudipta Majumdar, Peter R. Girguis, Colin L. Raston, Gregory A. Weiss

published 30 Jan 2020

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Recombination and gene loss occur simultaneously during bacterial horizontal gene transfer

Bert Ely

published 28 Jan 2020

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Phylogenetic relationships of Atractylodes lancea, A. chinensis and A. macrocephala, revealed by complete plastome and nuclear gene sequences

Liqiang Wang, Hui Zhang, Xi Wu, Ziyue Wang, Weiwei Fang, Mei Jiang, Haimei Chen, Linfang Huang, Chang Liu

published 28 Jan 2020

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Assessment of the clinical utility of four NGS panels in myeloid malignancies. Suggestions for NGS panel choice or design

Almudena Aguilera-Diaz, Iria Vazquez, Beñat Ariceta, Amagoia Mañú, Zuriñe Blasco-Iturri, Sara Palomino-Echeverría, María José Larrayoz, Ramón García-Sanz, María Isabel Prieto-Conde, María del Carmen Chillón, Ana Alfonso-Pierola, Felipe Prosper, Marta Fernandez-Mercado, María José Calasanz

published 24 Jan 2020

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Functional dynamics of bacterial species in the mouse gut microbiome revealed by metagenomic and metatranscriptomic analyses

Youn Wook Chung, Ho-Jin Gwak, Sungmin Moon, Mina Rho, Ji-Hwan Ryu

published 24 Jan 2020

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A graph-based algorithm for RNA-seq data normalization

Diem-Trang Tran, Aditya Bhaskara, Balagurunathan Kuberan, Matthew Might

published 24 Jan 2020

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Disease-relevant mutations alter amino acid co-evolution networks in the second nucleotide binding domain of CFTR

Gabrianne Ivey, Robert T. Youker

published 24 Jan 2020

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RNAmountAlign: Efficient software for local, global, semiglobal pairwise and multiple RNA sequence/structure alignment

Amir H. Bayegan, Peter Clote

published 24 Jan 2020

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How “simple” methodological decisions affect interpretation of population structure based on reduced representation library DNA sequencing: A case study using the lake whitefish

Carly F. Graham, Douglas R. Boreham, Richard G. Manzon, Wendylee Stott, Joanna Y. Wilson, Christopher M. Somers

published 24 Jan 2020

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Molecular sequencing and morphological identification reveal similar patterns in native bee communities across public and private grasslands of eastern North Dakota

Brian Darby, Russ Bryant, Abby Keller, Madison Jochim, Josephine Moe, Zoe Schreiner, Carrie Pratt, Ned H. Euliss Jr., Mia Park, Rebecca Simmons, Clint Otto

published 23 Jan 2020

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Transcriptome-wide identification of novel circular RNAs in soybean in response to low-phosphorus stress

Lingling Lv, Kaiye Yu, Haiyan Lü, Xiangqian Zhang, Xiaoqian Liu, Chongyuan Sun, Huanqing Xu, Jinyu Zhang, Xiaohui He, Dan Zhang

published 21 Jan 2020

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Comparison of the myometrial transcriptome from singleton and twin pregnancies by RNA-Seq

Sarah Arrowsmith, Yongxiang Fang, Andrew Sharp

published 17 Jan 2020

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Astrocyte senescence promotes glutamate toxicity in cortical neurons

Chandani Limbad, Tal Ronnen Oron, Fatouma Alimirah, Albert R. Davalos, Tara E. Tracy, Li Gan, Pierre-Yves Desprez, Judith Campisi

published 16 Jan 2020

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