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Sequencing techniques

Development of a sensitive primer extension method for direct detection and quantification of miRNAs from plants

Ulku Baykal

published 12 Mar 2020

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Pulse-Field capillary electrophoresis of repeat-primed PCR amplicons for analysis of large repeats in Spinocerebellar Ataxia Type 10

Vera Hashem, Anjana Tiwari, Brittani Bewick, Helio A. G. Teive, Mariana Moscovich, Birgitt Schüele, Khalaf Bushara, Matt Bower, Astrid Rasmussen, Yu-Chih Tsai, Tyson Clark, Karen McFarland, Tetsuo Ashizawa

published 11 Mar 2020

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Genetic diversity and evolutionary analysis of human respirovirus type 3 strains isolated in Kenya using complete hemagglutinin-neuraminidase (HN) gene

Juliet Elusah, Wallace Dimbuson Bulimo, Silvanos Mukunzi Opanda, Samwel Lifumo Symekher, Fred Wamunyokoli

published 10 Mar 2020

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A pilot study: VereMTB detection kit for rapid detection of multidrug-resistant mycobcterium tuberculosis in clinical sputum samples

Xichao Ou, Qiang Li, Dan Su, Hui Xia, Shengfen Wang, Bing Zhao, Yanlin Zhao

published 09 Mar 2020

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Transcriptomic analysis to elucidate the response of honeybees (Hymenoptera: Apidae) to amitraz treatment

Liang Ye, Peng Liu, Tengfei Shi, Anran Wang, Yujie Zhu, Lai Li, Linsheng Yu

published 06 Mar 2020

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Induction of competent cells for Agrobacterium tumefaciens-mediated stable transformation of common bean (Phaseolus vulgaris L.)

Guo-qing Song, Xue Han, Andrew T. Wiersma, Xiaojuan Zong, Halima E. Awale, James D. Kelly

published 05 Mar 2020

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Biochemical, genetic and transcriptional characterization of multibacteriocin production by the anti-pneumococcal dairy strain Streptococcus infantarius LP90

Cristina Campanero, Estefanía Muñoz-Atienza, Dzung B. Diep, Javier Feito, Sara Arbulu, Rosa del Campo, Ingolf F. Nes, Pablo E. Hernández, Carmen Herranz, Luis M. Cintas

published 05 Mar 2020

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Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut

Yonatan Sher, Matthew R. Olm, Tali Raveh-Sadka, Christopher T. Brown, Ruth Sher, Brian Firek, Robyn Baker, Michael J. Morowitz, Jillian F. Banfield

published 04 Mar 2020

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Postprandial transfer of colostral extracellular vesicles and their protein and miRNA cargo in neonatal calves

Benedikt Kirchner, Dominik Buschmann, Vijay Paul, Michael W. Pfaffl

published 28 Feb 2020

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Analysis of unusual and signature APOBEC-mutations in HIV-1 pol next-generation sequences

Philip L. Tzou, Sergei L. Kosakovsky Pond, Santiago Avila-Rios, Susan P. Holmes, Rami Kantor, Robert W. Shafer

published 26 Feb 2020

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New evidence of bovine leukemia virus circulating in Myanmar cattle through epidemiological and molecular characterization

Kyaw Kyaw Moe, Meripet Polat, Liushiqi Borjigin, Ryosuke Matsuura, Si Thu Hein, Hla Hla Moe, Yoko Aida

published 21 Feb 2020

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The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA

David A. Nix, Sabine Hellwig, Christopher Conley, Alun Thomas, Carrie L. Fuertes, Cindy L. Hamil, Preetida J. Bhetariya, Ignacio Garrido-Laguna, Gabor T. Marth, Mary P. Bronner, Hunter R. Underhill

published 21 Feb 2020

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Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak

Marjolein J. Poen, Anne Pohlmann, Clara Amid, Theo M. Bestebroer, Sharon M. Brookes, Ian H. Brown, Helen Everett, Claudia M. E. Schapendonk, Rachel D. Scheuer, Saskia L. Smits, Martin Beer, Ron A. M. Fouchier, Richard J. Ellis

published 20 Feb 2020

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