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Sequencing techniques

Isolation of a novel species in the genus Cupriavidus from a patient with sepsis using whole genome sequencing

Oh Joo Kweon, Yong Kwan Lim, [ ... ], Mi-Kyung Lee

Liquid biopsy-based tumor profiling for metastatic colorectal cancer patients with ultra-deep targeted sequencing

Jun-Kyu Kang, Sunghoon Heo, [ ... ], Tae-You Kim

De novo transcriptome sequence of Senna tora provides insights into anthraquinone biosynthesis

Sang-Ho Kang, Woo-Haeng Lee, [ ... ], Tae-Jin Oh

Comparative analysis of tissue-specific transcriptomic responses to nitrogen stress in spinach (Spinacia oleracea)

Vijay Joshi, Madhumita Joshi, Arianne Penalosa

Selection and exploitation of prevalent, tandemly repeated genomic targets for improved real-time PCR-based detection of Wuchereria bancrofti and Plasmodium falciparum in mosquitoes

Michael F. Zulch, Nils Pilotte, [ ... ], Steven A. Williams

Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection

Travis M. Ruff, Elliott J. Marston, [ ... ], Deven R. See

Combining signal and sequence to detect RNA polymerase initiation in ATAC-seq data

Ignacio J. Tripodi, Murad Chowdhury, Margaret Gruca, Robin D. Dowell

Benchmarking RNA-seq differential expression analysis methods using spike-in and simulation data

Bukyung Baik, Sora Yoon, Dougu Nam

Sequence count data are poorly fit by the negative binomial distribution

Stijn Hawinkel, J. C. W. Rayner, Luc Bijnens, Olivier Thas

QUATgo: Protein quaternary structural attributes predicted by two-stage machine learning approaches with heterogeneous feature encoding

Chi-Hua Tung, Ching-Hsuan Chien, [ ... ], Yen-Wei Chu

Crewmember microbiome may influence microbial composition of ISS habitable surfaces

Aram Avila-Herrera, James Thissen, [ ... ], Crystal Jaing

Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?

Cécile Angebault, Mathilde Payen, [ ... ], Françoise Botterel

Combining independent de novo assemblies to optimize leaf transcriptome of Persian walnut

Mohammad Sadat-Hosseini, Mohammad Reza Bakhtiarizadeh, [ ... ], Kourosh Vahdati

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