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Sequencing techniques

Bag-of-words is competitive with sum-of-embeddings language-inspired representations on protein inference

Frixos Papadopoulos, Tilman Sanchez-Elsner, Mahesan Niranjan, Ashley I. Heinson

published 06 Aug 2025

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A comparison of DNA methylation detection between HiFi sequencing and whole genome bisulfite sequencing in monozygotic twins with Down syndrome

Kanyanee Promsawan, Chalurmpon Srichomthong, Monnat Pongpanich, Vorasuk Shotelersuk

published 05 Aug 2025

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Stable preservation and recovery of methylation marks from FTA elute cards in species with nucleated red blood cells using a customized DNA extraction method

Livia Gerber, Sarah L. Whiteley, Erin E. Hahn, Clare E. Holleley

published 31 Jul 2025

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cONcat: Computational reconstruction of concatenated fragments from long Oxford Nanopore reads

Alexander J. Petri, Mai Thi-Huyen Nguyen, Anjali Rajwar, Erik Benson, Kristoffer Sahlin

published 24 Jul 2025

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Identification of podocyte molecular markers in diabetic kidney disease via single-cell RNA sequencing and machine learning

Hailin Li, Quhuan Li, Zuyan Fan, Yue Shen, Jiao Li, Fengxia Zhang

published 21 Jul 2025

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Molecular characterization of indigenous human adenovirus (HAdV) isolate from healthy infant stool sample and screening of its antibodies in archival serum samples in Türkiye

Zafer Yazici, Huseyin Baskin, Seda Gozel, Hanne Nur Kurucay, Cuneyt Tamer, Hamza Kadi, Emre Ozan, Bahadir Muftuoglu, Vahide Bayrakal, Harun Albayrak, Semra Okur-Gumusova, Ahmed Eisa Elhag

published 18 Jul 2025

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Extensive novel diversity and phenotypic associations in the dromedary camel microbiome are revealed through deep metagenomics and machine learning

Fathi A. Mubaraki

published 17 Jul 2025

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Cysteine pattern barcoding-based dataset filtration enhances the machine learning-assisted interpretation of Conus venom peptide therapeutics

Rimsha Bibi, Noshaba Qasmi, Sajid Rashid

published 11 Jul 2025

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Seasonal dynamics and molecular phylogenetic studies on cercariae in Central Zone of Kashmir valley

Zahoor Ahmad Wani, Rafiq A. Shahardar, Kamal H. Bulbul, Idrees M. Allaie, Showkat A. Shah, Shabir A. Rather, Aiman Ashraf, Shahana Tramboo, Asif H. Khan

published 10 Jul 2025

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Genetic association of intelligence with longevity in Drosophila melanogaster

Mousumee Khan, Enkhchimeg Lkhagva, Hae-mi Kim, Chongkai Zhai, Sharif Hasan Siddiqui, Seong-Tshool Hong

published 02 Jul 2025

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Next-Generation Sequencing (NGS) in non-small cell lung carcinoma: A real-world experience in the public health system of Galicia (Northwest Spain)

Ihab Abdulkader-Nallib, José Manuel Cameselle-Teijeiro, Iván Lesende-Rodríguez, Raquel Pérez-Becerra, José Ramón Antúnez-López, Jorge García-González, Luis León-Mateos, María Sánchez-Ares

published 01 Jul 2025

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Towards resilience: Transcriptional insights on flavonoid biosynthesis during peanut seed maturation phases

Gustavo Roberto Fonseca de Oliveira, Liam Walker, Rômulo Pedro Macêdo Lima, Thiago Barbosa Batista, Clíssia Barboza Mastrangelo, Edvaldo Aparecido Amaral da Silva

published 01 Jul 2025

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Analysing genome sequences and associated metadata during the COVID-19 pandemic in Iraq revealed points to be improved: An observational retrospective study

Ali Hadi Abbas, Aoula Al-Zebeeby, Mohammed Al-Saadi, Ahmed Jasim Neamah

published 30 Jun 2025

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